Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.2□□□□□ -1.58
LMO4P61968 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC5.2□□□□□ -1.58
LMO4P61968 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 AC013731.1-201ENST00000604340 883 ntBASIC5.2□□□□□ -1.58
LMO4P61968 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.2□□□□□ -1.58
LMO4P61968 AC004801.6-201ENST00000616571 978 ntBASIC5.2□□□□□ -1.58
LMO4P61968 AL355480.1-201ENST00000629041 99 ntBASIC5.2□□□□□ -1.58
LMO4P61968 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.2□□□□□ -1.58
LMO4P61968 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 EIF3EP1-201ENST00000433978 1316 ntBASIC5.2□□□□□ -1.58
LMO4P61968 PARN-201ENST00000341484 2100 ntTSL 2 BASIC5.2□□□□□ -1.58
LMO4P61968 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.2□□□□□ -1.58
LMO4P61968 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LMO4P61968 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC5.19□□□□□ -1.58
LMO4P61968 RMST-210ENST00000640149 2844 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO4P61968 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.19□□□□□ -1.58
LMO4P61968 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LMO4P61968 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO4P61968 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
LMO4P61968 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
LMO4P61968 MAPK10-344ENST00000641718 3746 ntBASIC5.19□□□□□ -1.58
LMO4P61968 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LMO4P61968 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 AC139426.3-201ENST00000605648 2059 ntBASIC5.19□□□□□ -1.58
LMO4P61968 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
LMO4P61968 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 AC105235.1-201ENST00000623208 1816 ntBASIC5.19□□□□□ -1.58
LMO4P61968 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LMO4P61968 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
LMO4P61968 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.19□□□□□ -1.58
LMO4P61968 SNORA21-201ENST00000362423 132 ntBASIC5.19□□□□□ -1.58
LMO4P61968 RNU1-49P-201ENST00000363468 159 ntBASIC5.19□□□□□ -1.58
LMO4P61968 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LMO4P61968 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO4P61968 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 PPIAP10-201ENST00000438675 458 ntBASIC5.19□□□□□ -1.58
LMO4P61968 AL353662.1-201ENST00000439099 327 ntBASIC5.19□□□□□ -1.58
LMO4P61968 VN1R38P-201ENST00000450265 887 ntBASIC5.19□□□□□ -1.58
LMO4P61968 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO4P61968 AC090958.1-201ENST00000511122 351 ntBASIC5.19□□□□□ -1.58
LMO4P61968 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.19□□□□□ -1.58
LMO4P61968 MTND2P31-201ENST00000512602 616 ntBASIC5.19□□□□□ -1.58
LMO4P61968 PRMT5P1-201ENST00000514351 598 ntBASIC5.19□□□□□ -1.58
LMO4P61968 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.19□□□□□ -1.58
LMO4P61968 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.19□□□□□ -1.58
LMO4P61968 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO4P61968 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.19□□□□□ -1.58
LMO4P61968 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.19□□□□□ -1.58
LMO4P61968 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC5.19□□□□□ -1.58
LMO4P61968 AL121579.2-201ENST00000555466 590 ntBASIC5.19□□□□□ -1.58
LMO4P61968 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.19□□□□□ -1.58
LMO4P61968 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.19□□□□□ -1.58
LMO4P61968 LINC00556-201ENST00000569603 412 ntBASIC5.19□□□□□ -1.58
LMO4P61968 MIR5095-201ENST00000578844 88 ntBASIC5.19□□□□□ -1.58
LMO4P61968 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.19□□□□□ -1.58
LMO4P61968 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO4P61968 AC073333.2-201ENST00000603589 769 ntBASIC5.19□□□□□ -1.58
LMO4P61968 AL591167.1-201ENST00000607321 456 ntBASIC5.19□□□□□ -1.58
LMO4P61968 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO4P61968 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 AL096712.1-201ENST00000614561 159 ntBASIC5.19□□□□□ -1.58
LMO4P61968 RFPL4AP6-201ENST00000616792 846 ntBASIC5.19□□□□□ -1.58
LMO4P61968 AL512652.1-201ENST00000619006 500 ntBASIC5.19□□□□□ -1.58
LMO4P61968 AL391262.2-201ENST00000622466 494 ntBASIC5.19□□□□□ -1.58
LMO4P61968 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC5.19□□□□□ -1.58
LMO4P61968 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LMO4P61968 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.19□□□□□ -1.58
LMO4P61968 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO4P61968 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO4P61968 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 AC007406.5-201ENST00000570140 3170 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms