Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.94□□□□□ -1.46
LIM2P55344 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.94□□□□□ -1.46
LIM2P55344 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
LIM2P55344 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.94□□□□□ -1.46
LIM2P55344 AL034374.2-201ENST00000605281 548 ntBASIC5.94□□□□□ -1.46
LIM2P55344 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.94□□□□□ -1.46
LIM2P55344 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.94□□□□□ -1.46
LIM2P55344 uc_338.29-201ENST00000615099 168 ntBASIC5.94□□□□□ -1.46
LIM2P55344 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.94□□□□□ -1.46
LIM2P55344 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
LIM2P55344 AC007998.4-201ENST00000612496 2533 ntBASIC5.94□□□□□ -1.46
LIM2P55344 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LIM2P55344 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
LIM2P55344 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
LIM2P55344 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.94□□□□□ -1.46
LIM2P55344 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIM2P55344 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.93□□□□□ -1.46
LIM2P55344 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIM2P55344 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIM2P55344 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.93□□□□□ -1.46
LIM2P55344 RN7SKP237-201ENST00000364663 301 ntBASIC5.93□□□□□ -1.46
LIM2P55344 RNU11-6P-201ENST00000391127 133 ntBASIC5.93□□□□□ -1.46
LIM2P55344 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.93□□□□□ -1.46
LIM2P55344 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
LIM2P55344 AL445238.1-204ENST00000400311 463 ntBASIC5.93□□□□□ -1.46
LIM2P55344 RNA5SP198-201ENST00000410376 127 ntBASIC5.93□□□□□ -1.46
LIM2P55344 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.93□□□□□ -1.46
LIM2P55344 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.93□□□□□ -1.46
LIM2P55344 RPS17P17-201ENST00000419392 409 ntBASIC5.93□□□□□ -1.46
LIM2P55344 AC010086.1-201ENST00000437359 1052 ntBASIC5.93□□□□□ -1.46
LIM2P55344 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.93□□□□□ -1.46
LIM2P55344 OR13K1P-201ENST00000444577 975 ntBASIC5.93□□□□□ -1.46
LIM2P55344 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LIM2P55344 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.93□□□□□ -1.46
LIM2P55344 AL133351.3-201ENST00000454998 193 ntBASIC5.93□□□□□ -1.46
LIM2P55344 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.93□□□□□ -1.46
LIM2P55344 RANP2-201ENST00000456833 229 ntBASIC5.93□□□□□ -1.46
LIM2P55344 RN7SL552P-201ENST00000462094 276 ntBASIC5.93□□□□□ -1.46
LIM2P55344 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.93□□□□□ -1.46
LIM2P55344 AC005017.1-201ENST00000482002 490 ntBASIC5.93□□□□□ -1.46
LIM2P55344 AC106822.1-201ENST00000502647 526 ntBASIC5.93□□□□□ -1.46
LIM2P55344 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.93□□□□□ -1.46
LIM2P55344 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.93□□□□□ -1.46
LIM2P55344 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.93□□□□□ -1.46
LIM2P55344 OR4A41P-201ENST00000533053 928 ntBASIC5.93□□□□□ -1.46
LIM2P55344 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.93□□□□□ -1.46
LIM2P55344 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.93□□□□□ -1.46
LIM2P55344 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.93□□□□□ -1.46
LIM2P55344 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.93□□□□□ -1.46
LIM2P55344 AC121758.1-202ENST00000556917 658 ntBASIC5.93□□□□□ -1.46
LIM2P55344 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.93□□□□□ -1.46
LIM2P55344 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.93□□□□□ -1.46
LIM2P55344 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.93□□□□□ -1.46
LIM2P55344 RN7SL230P-201ENST00000580835 303 ntBASIC5.93□□□□□ -1.46
LIM2P55344 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.93□□□□□ -1.46
LIM2P55344 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.93□□□□□ -1.46
LIM2P55344 AC010998.3-201ENST00000613871 631 ntBASIC5.93□□□□□ -1.46
LIM2P55344 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIM2P55344 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LIM2P55344 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LIM2P55344 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.93□□□□□ -1.46
LIM2P55344 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
LIM2P55344 AKAP17BP-201ENST00000431706 2719 ntBASIC5.93□□□□□ -1.46
LIM2P55344 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIM2P55344 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIM2P55344 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.93□□□□□ -1.46
LIM2P55344 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
LIM2P55344 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIM2P55344 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LIM2P55344 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.92□□□□□ -1.46
LIM2P55344 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.92□□□□□ -1.46
LIM2P55344 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LIM2P55344 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.92□□□□□ -1.46
LIM2P55344 AL133243.2-201ENST00000610331 1621 ntBASIC5.92□□□□□ -1.46
LIM2P55344 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIM2P55344 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LIM2P55344 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIM2P55344 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LIM2P55344 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIM2P55344 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.92□□□□□ -1.46
LIM2P55344 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIM2P55344 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
LIM2P55344 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
LIM2P55344 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.92□□□□□ -1.46
LIM2P55344 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIM2P55344 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIM2P55344 RNA5SP346-201ENST00000363541 121 ntBASIC5.92□□□□□ -1.46
LIM2P55344 AL139805.1-201ENST00000407837 289 ntBASIC5.92□□□□□ -1.46
LIM2P55344 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.92□□□□□ -1.46
LIM2P55344 AL022237.1-201ENST00000446663 358 ntBASIC5.92□□□□□ -1.46
LIM2P55344 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.92□□□□□ -1.46
LIM2P55344 AC103563.5-201ENST00000455643 364 ntBASIC5.92□□□□□ -1.46
LIM2P55344 YRDCP3-201ENST00000456507 480 ntBASIC5.92□□□□□ -1.46
LIM2P55344 MTND6P8-201ENST00000503471 522 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms