Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH6P55285 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 AC096921.2-201ENST00000561507 1916 ntBASIC6.5□□□□□ -1.37
CDH6P55285 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH6P55285 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH6P55285 USP9YP3-201ENST00000434481 1766 ntBASIC6.5□□□□□ -1.37
CDH6P55285 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH6P55285 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CDH6P55285 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CDH6P55285 YWHAZP4-201ENST00000392459 708 ntBASIC6.5□□□□□ -1.37
CDH6P55285 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.5□□□□□ -1.37
CDH6P55285 HMGA1P8-201ENST00000414130 321 ntBASIC6.5□□□□□ -1.37
CDH6P55285 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.5□□□□□ -1.37
CDH6P55285 AC007562.1-201ENST00000421819 517 ntBASIC6.5□□□□□ -1.37
CDH6P55285 OSTCP4-201ENST00000424397 449 ntBASIC6.5□□□□□ -1.37
CDH6P55285 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.5□□□□□ -1.37
CDH6P55285 BMP6P1-201ENST00000431230 679 ntBASIC6.5□□□□□ -1.37
CDH6P55285 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.5□□□□□ -1.37
CDH6P55285 AC016908.1-201ENST00000442571 1219 ntBASIC6.5□□□□□ -1.37
CDH6P55285 AC079922.1-201ENST00000443291 359 ntBASIC6.5□□□□□ -1.37
CDH6P55285 OR2L9P-201ENST00000444456 913 ntBASIC6.5□□□□□ -1.37
CDH6P55285 AC023274.2-201ENST00000445264 521 ntBASIC6.5□□□□□ -1.37
CDH6P55285 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.5□□□□□ -1.37
CDH6P55285 RARRES2P3-201ENST00000457739 473 ntBASIC6.5□□□□□ -1.37
CDH6P55285 RPS7P10-201ENST00000464254 603 ntBASIC6.5□□□□□ -1.37
CDH6P55285 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 RN7SL612P-201ENST00000497704 295 ntBASIC6.5□□□□□ -1.37
CDH6P55285 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.5□□□□□ -1.37
CDH6P55285 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH6P55285 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.5□□□□□ -1.37
CDH6P55285 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 NPIPB1P-202ENST00000588786 828 ntBASIC6.5□□□□□ -1.37
CDH6P55285 AC063977.7-201ENST00000594454 337 ntBASIC6.5□□□□□ -1.37
CDH6P55285 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH6P55285 AC016590.3-201ENST00000611171 753 ntBASIC6.5□□□□□ -1.37
CDH6P55285 AC005899.7-201ENST00000618199 588 ntBASIC6.5□□□□□ -1.37
CDH6P55285 AC089999.3-201ENST00000622440 577 ntBASIC6.5□□□□□ -1.37
CDH6P55285 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 AC116667.2-201ENST00000641075 823 ntBASIC6.5□□□□□ -1.37
CDH6P55285 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH6P55285 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH6P55285 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH6P55285 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH6P55285 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CDH6P55285 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH6P55285 AL117378.2-201ENST00000622916 1337 ntBASIC6.5□□□□□ -1.37
CDH6P55285 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CDH6P55285 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH6P55285 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH6P55285 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH6P55285 HSPD1P8-201ENST00000400121 1658 ntBASIC6.49□□□□□ -1.37
CDH6P55285 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH6P55285 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH6P55285 HDAC1P2-201ENST00000453661 1398 ntBASIC6.49□□□□□ -1.37
CDH6P55285 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH6P55285 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH6P55285 RNA5SP77-201ENST00000365394 120 ntBASIC6.49□□□□□ -1.37
CDH6P55285 PRELID1P1-201ENST00000403549 660 ntBASIC6.49□□□□□ -1.37
CDH6P55285 RN7SKP38-201ENST00000410782 309 ntBASIC6.49□□□□□ -1.37
CDH6P55285 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH6P55285 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH6P55285 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH6P55285 RPS7P14-201ENST00000426405 583 ntBASIC6.49□□□□□ -1.37
CDH6P55285 AC112492.2-201ENST00000432774 1030 ntBASIC6.49□□□□□ -1.37
CDH6P55285 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH6P55285 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH6P55285 RPL12P49-201ENST00000441100 121 ntBASIC6.49□□□□□ -1.37
CDH6P55285 AC234771.2-201ENST00000445718 597 ntBASIC6.49□□□□□ -1.37
CDH6P55285 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH6P55285 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH6P55285 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.49□□□□□ -1.37
CDH6P55285 RN7SL326P-201ENST00000477493 296 ntBASIC6.49□□□□□ -1.37
CDH6P55285 RPL12P31-201ENST00000478433 450 ntBASIC6.49□□□□□ -1.37
CDH6P55285 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH6P55285 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH6P55285 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.49□□□□□ -1.37
CDH6P55285 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH6P55285 RNA5SP116-201ENST00000516132 98 ntBASIC6.49□□□□□ -1.37
CDH6P55285 RNA5SP206-201ENST00000516703 121 ntBASIC6.49□□□□□ -1.37
CDH6P55285 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH6P55285 RPA2P3-201ENST00000533268 770 ntBASIC6.49□□□□□ -1.37
CDH6P55285 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.49□□□□□ -1.37
CDH6P55285 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH6P55285 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH6P55285 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH6P55285 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH6P55285 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms