Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.51□□□□□ -1.37
LIMK1P53667 MIR4301-201ENST00000577203 66 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK1P53667 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.51□□□□□ -1.37
LIMK1P53667 AC015849.6-201ENST00000605454 474 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.51□□□□□ -1.37
LIMK1P53667 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK1P53667 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.51□□□□□ -1.37
LIMK1P53667 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK1P53667 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LIMK1P53667 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
LIMK1P53667 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
LIMK1P53667 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LIMK1P53667 SPATA31C1-201ENST00000420021 3895 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
LIMK1P53667 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
LIMK1P53667 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.51□□□□□ -1.37
LIMK1P53667 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
LIMK1P53667 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.51□□□□□ -1.37
LIMK1P53667 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK1P53667 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
LIMK1P53667 EIF3EP1-201ENST00000433978 1316 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK1P53667 AC053481.2-202ENST00000582394 1500 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 CASC19-246ENST00000641625 1606 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.5□□□□□ -1.37
LIMK1P53667 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK1P53667 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK1P53667 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
LIMK1P53667 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK1P53667 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.5□□□□□ -1.37
LIMK1P53667 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.5□□□□□ -1.37
LIMK1P53667 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK1P53667 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK1P53667 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
LIMK1P53667 RN7SKP47-201ENST00000365347 328 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 LYPLA1P3-201ENST00000402650 695 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 AL929472.1-201ENST00000417484 429 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.5□□□□□ -1.37
LIMK1P53667 AC002127.1-201ENST00000421305 225 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 MTND6P12-201ENST00000428247 522 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 OR6C71P-201ENST00000432580 913 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.5□□□□□ -1.37
LIMK1P53667 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.5□□□□□ -1.37
LIMK1P53667 RN7SL273P-201ENST00000481561 299 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.5□□□□□ -1.37
LIMK1P53667 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.5□□□□□ -1.37
LIMK1P53667 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.5□□□□□ -1.37
LIMK1P53667 LINC00556-201ENST00000569603 412 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK1P53667 NPIPB1P-202ENST00000588786 828 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 FAM72A-208ENST00000607379 1139 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 AC092266.1-201ENST00000610958 165 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 AC022467.1-201ENST00000614738 749 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 MIR6826-201ENST00000617808 98 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK1P53667 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK1P53667 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
LIMK1P53667 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.5□□□□□ -1.37
LIMK1P53667 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK1P53667 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.5□□□□□ -1.37
LIMK1P53667 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.5□□□□□ -1.37
LIMK1P53667 ZNF101P1-201ENST00000435701 1720 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK1P53667 PRNCR1-201ENST00000635449 12727 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK1P53667 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LIMK1P53667 AC090771.1-201ENST00000585803 1618 ntBASIC6.5□□□□□ -1.37
LIMK1P53667 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 AC105114.1-201ENST00000624795 1862 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.49□□□□□ -1.37
LIMK1P53667 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.49□□□□□ -1.37
LIMK1P53667 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.49□□□□□ -1.37
LIMK1P53667 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 OR7E25P-201ENST00000344844 931 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 RNA5SP284-201ENST00000384547 118 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms