Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
BRCA2P51587 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
BRCA2P51587 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
BRCA2P51587 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
BRCA2P51587 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
BRCA2P51587 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BRCA2P51587 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.5□□□□□ -1.37
BRCA2P51587 AC104164.1-201ENST00000460282 590 ntBASIC6.5□□□□□ -1.37
BRCA2P51587 AC114728.1-201ENST00000488289 483 ntBASIC6.5□□□□□ -1.37
BRCA2P51587 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.5□□□□□ -1.37
BRCA2P51587 NRBF2P4-201ENST00000520874 850 ntBASIC6.5□□□□□ -1.37
BRCA2P51587 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.5□□□□□ -1.37
BRCA2P51587 TMPRSS4-218ENST00000534111 5550 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
BRCA2P51587 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
BRCA2P51587 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
BRCA2P51587 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.5□□□□□ -1.37
BRCA2P51587 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.5□□□□□ -1.37
BRCA2P51587 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
BRCA2P51587 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC6.5□□□□□ -1.37
BRCA2P51587 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
BRCA2P51587 U3.36-201ENST00000408418 213 ntBASIC6.5□□□□□ -1.37
BRCA2P51587 RPS15AP30-201ENST00000420976 390 ntBASIC6.5□□□□□ -1.37
BRCA2P51587 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.5□□□□□ -1.37
BRCA2P51587 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.5□□□□□ -1.37
BRCA2P51587 AL110118.1-201ENST00000553543 400 ntBASIC6.5□□□□□ -1.37
BRCA2P51587 NMNAT1P5-201ENST00000559657 841 ntBASIC6.5□□□□□ -1.37
BRCA2P51587 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.5□□□□□ -1.37
BRCA2P51587 AC009704.2-201ENST00000618739 483 ntBASIC6.5□□□□□ -1.37
BRCA2P51587 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
BRCA2P51587 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.5□□□□□ -1.37
BRCA2P51587 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
BRCA2P51587 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCA2P51587 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
BRCA2P51587 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
BRCA2P51587 RPL23P2-201ENST00000320371 421 ntBASIC6.49□□□□□ -1.37
BRCA2P51587 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
BRCA2P51587 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCA2P51587 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.49□□□□□ -1.37
BRCA2P51587 SNORA70.11-201ENST00000515987 138 ntBASIC6.49□□□□□ -1.37
BRCA2P51587 SNORA70.13-201ENST00000516116 138 ntBASIC6.49□□□□□ -1.37
BRCA2P51587 BNIP3P1-201ENST00000547295 580 ntBASIC6.49□□□□□ -1.37
BRCA2P51587 AC104687.2-201ENST00000604442 342 ntBASIC6.49□□□□□ -1.37
BRCA2P51587 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCA2P51587 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
BRCA2P51587 AC130365.1-201ENST00000530524 1553 ntBASIC6.49□□□□□ -1.37
BRCA2P51587 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCA2P51587 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCA2P51587 AC068870.1-201ENST00000563737 2455 ntBASIC6.49□□□□□ -1.37
BRCA2P51587 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCA2P51587 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
BRCA2P51587 AC013442.1-201ENST00000397347 228 ntBASIC6.49□□□□□ -1.37
BRCA2P51587 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCA2P51587 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCA2P51587 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCA2P51587 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.49□□□□□ -1.37
BRCA2P51587 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCA2P51587 MIR6758-201ENST00000620653 63 ntBASIC6.49□□□□□ -1.37
BRCA2P51587 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
BRCA2P51587 CACNB2-216ENST00000617363 4385 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCA2P51587 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCA2P51587 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCA2P51587 PHF8-204ENST00000357988 6024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 OR5M12P-201ENST00000423388 929 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 AL133173.1-201ENST00000423458 397 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 USP9YP9-201ENST00000429406 715 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 CEACAMP7-201ENST00000444105 496 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
BRCA2P51587 TPT1P13-201ENST00000449760 499 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 NUTF2P7-201ENST00000453086 375 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.48□□□□□ -1.37
BRCA2P51587 BRD9P1-201ENST00000529855 560 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 AC006116.3-201ENST00000592968 361 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCA2P51587 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.48□□□□□ -1.37
BRCA2P51587 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.48□□□□□ -1.37
BRCA2P51587 HDAC1P2-201ENST00000453661 1398 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 AC016583.1-201ENST00000624221 2431 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCA2P51587 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
BRCA2P51587 CYP4F32P-201ENST00000426492 504 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCA2P51587 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCA2P51587 AC083982.1-201ENST00000485679 344 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCA2P51587 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCA2P51587 AL162456.1-201ENST00000634535 2006 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.48□□□□□ -1.37
BRCA2P51587 PGPEP1-202ENST00000269919 7092 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
BRCA2P51587 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms