Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 PRUNEP1-201ENST00000425846 705 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 AC083862.1-201ENST00000427378 1242 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 BTG3P1-201ENST00000435859 716 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC13P31276 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.74□□□□□ -1.33
HOXC13P31276 CT45A11P-201ENST00000448043 1134 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.74□□□□□ -1.33
HOXC13P31276 AL359839.1-201ENST00000451975 1160 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC13P31276 AC068522.1-201ENST00000482895 345 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC13P31276 AC131392.1-201ENST00000506490 633 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 AC096754.1-201ENST00000508904 818 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 AC011411.1-201ENST00000509592 876 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 SNORA74.1-201ENST00000516320 180 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC13P31276 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.74□□□□□ -1.33
HOXC13P31276 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.74□□□□□ -1.33
HOXC13P31276 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC13P31276 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.74□□□□□ -1.33
HOXC13P31276 AC005632.2-201ENST00000564271 828 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC13P31276 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC13P31276 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXC13P31276 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC13P31276 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 AC026124.2-201ENST00000621847 656 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 AC018628.1-201ENST00000624147 3819 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXC13P31276 AP003486.1-201ENST00000525716 3994 ntBASIC6.74□□□□□ -1.33
HOXC13P31276 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HOXC13P31276 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HOXC13P31276 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
HOXC13P31276 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.74□□□□□ -1.33
HOXC13P31276 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXC13P31276 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXC13P31276 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC13P31276 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC13P31276 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC13P31276 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXC13P31276 Z93929.1-201ENST00000418200 1475 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 AC011455.2-201ENST00000599320 3336 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC13P31276 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXC13P31276 AP000866.6-201ENST00000638898 3579 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC13P31276 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC13P31276 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC13P31276 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXC13P31276 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXC13P31276 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC13P31276 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC13P31276 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HOXC13P31276 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.73□□□□□ -1.33
HOXC13P31276 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HOXC13P31276 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXC13P31276 AL139415.1-201ENST00000424862 352 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 AC099782.1-201ENST00000425889 474 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.73□□□□□ -1.33
HOXC13P31276 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.73□□□□□ -1.33
HOXC13P31276 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.73□□□□□ -1.33
HOXC13P31276 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.73□□□□□ -1.33
HOXC13P31276 RPL19P11-201ENST00000495944 589 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 H3F3AP3-201ENST00000497682 407 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXC13P31276 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.73□□□□□ -1.33
HOXC13P31276 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.73□□□□□ -1.33
HOXC13P31276 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXC13P31276 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXC13P31276 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.73□□□□□ -1.33
HOXC13P31276 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXC13P31276 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.73□□□□□ -1.33
HOXC13P31276 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.73□□□□□ -1.33
HOXC13P31276 RN7SL208P-201ENST00000577964 296 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 AC016839.1-201ENST00000578162 867 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 MIR3614-201ENST00000581261 86 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 RPSAP75-201ENST00000605848 301 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXC13P31276 BX323046.1-201ENST00000610145 535 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 U1.41-201ENST00000617626 165 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 AL450226.2-201ENST00000622913 439 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 AC073488.6-201ENST00000632293 754 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXC13P31276 MAPK10-350ENST00000641777 965 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC13P31276 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC13P31276 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC13P31276 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC13P31276 AC104966.1-201ENST00000467010 1464 ntBASIC6.73□□□□□ -1.33
HOXC13P31276 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC13P31276 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HOXC13P31276 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC13P31276 AP002370.1-201ENST00000528055 1602 ntBASIC6.72□□□□□ -1.33
HOXC13P31276 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC13P31276 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC13P31276 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXC13P31276 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC13P31276 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC13P31276 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC13P31276 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms