Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.29□□□□□ -1.56
UPK1BO75841 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1BO75841 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1BO75841 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
UPK1BO75841 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1BO75841 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
UPK1BO75841 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
UPK1BO75841 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC5.28□□□□□ -1.56
UPK1BO75841 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.28□□□□□ -1.56
UPK1BO75841 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 RN7SKP72-201ENST00000362327 292 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.28□□□□□ -1.56
UPK1BO75841 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 RPSAP65-201ENST00000429660 595 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 EIF3IP1-201ENST00000433048 967 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC5.28□□□□□ -1.56
UPK1BO75841 ARMC8P1-201ENST00000443069 1289 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.28□□□□□ -1.56
UPK1BO75841 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.28□□□□□ -1.56
UPK1BO75841 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.28□□□□□ -1.56
UPK1BO75841 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 RN7SKP288-201ENST00000516227 268 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.28□□□□□ -1.56
UPK1BO75841 AP003499.1-201ENST00000527217 574 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 NPIPB14P-203ENST00000532298 987 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.28□□□□□ -1.56
UPK1BO75841 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
UPK1BO75841 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.28□□□□□ -1.56
UPK1BO75841 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC5.28□□□□□ -1.56
UPK1BO75841 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
UPK1BO75841 KARS-209ENST00000568378 459 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.28□□□□□ -1.56
UPK1BO75841 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
UPK1BO75841 COX6CP7-201ENST00000597056 208 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 AC019257.2-201ENST00000605539 497 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 AL353729.2-201ENST00000605859 1249 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 OR13Z2P-201ENST00000606338 555 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 AC097641.3-201ENST00000613523 464 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
UPK1BO75841 CREM-218ENST00000460270 1416 ntTSL 2 BASIC5.28□□□□□ -1.56
UPK1BO75841 EEF1A1P2-201ENST00000553854 1447 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1BO75841 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
UPK1BO75841 MBIP-201ENST00000318473 1586 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 NR1H5P-201ENST00000452683 1377 ntBASIC5.28□□□□□ -1.56
UPK1BO75841 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.28□□□□□ -1.56
UPK1BO75841 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1BO75841 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.28□□□□□ -1.56
UPK1BO75841 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1BO75841 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1BO75841 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.27□□□□□ -1.57
UPK1BO75841 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
UPK1BO75841 AC139426.3-201ENST00000605648 2059 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
UPK1BO75841 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1BO75841 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1BO75841 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1BO75841 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1BO75841 AC074375.1-201ENST00000372993 192 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1BO75841 SEPT7P2-202ENST00000398921 823 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.27□□□□□ -1.57
UPK1BO75841 AL139184.1-202ENST00000422303 222 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.27□□□□□ -1.57
UPK1BO75841 AL157884.1-201ENST00000424561 454 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.27□□□□□ -1.57
UPK1BO75841 SNRPEP5-201ENST00000425442 278 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 AC009784.1-201ENST00000426484 460 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 TCEA1P3-201ENST00000443005 880 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 GAPDHP33-201ENST00000443168 1013 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 RPL23AP60-201ENST00000450011 454 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms