Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 MTND4P21-201ENST00000453886 1357 ntBASIC6.95□□□□□ -1.3
FOXN3O00409 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC105235.1-201ENST00000623208 1816 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 SAGE3P-201ENST00000619800 1635 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
FOXN3O00409 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 MAPK10-287ENST00000641217 3037 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
FOXN3O00409 AC110373.1-201ENST00000505994 3505 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
FOXN3O00409 MAPK10-261ENST00000641050 3109 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC019178.1-201ENST00000392337 440 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.94□□□□□ -1.3
FOXN3O00409 AP003385.1-201ENST00000426387 893 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 VN1R53P-201ENST00000429536 957 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 AC003989.1-201ENST00000434569 565 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXN3O00409 AP000949.1-201ENST00000438328 629 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXN3O00409 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXN3O00409 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC092718.4-201ENST00000566639 716 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXN3O00409 AC019257.2-201ENST00000605539 497 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 AC024255.1-201ENST00000614376 102 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 AP001885.1-201ENST00000621658 558 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 AC106730.3-201ENST00000624568 641 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.94□□□□□ -1.3
FOXN3O00409 AL132640.3-201ENST00000630473 177 ntBASIC6.94□□□□□ -1.3
FOXN3O00409 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
FOXN3O00409 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
FOXN3O00409 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.94□□□□□ -1.3
FOXN3O00409 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.94□□□□□ -1.3
FOXN3O00409 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
FOXN3O00409 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
FOXN3O00409 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
FOXN3O00409 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
FOXN3O00409 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
FOXN3O00409 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
FOXN3O00409 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
FOXN3O00409 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
FOXN3O00409 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.94□□□□□ -1.3
FOXN3O00409 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
FOXN3O00409 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.93□□□□□ -1.3
FOXN3O00409 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.93□□□□□ -1.3
FOXN3O00409 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 OR6K3-202ENST00000368146 996 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.93□□□□□ -1.3
FOXN3O00409 SNORA7A-201ENST00000384765 139 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 RNU11-6P-201ENST00000391127 133 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXN3O00409 MED28P4-201ENST00000433137 572 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 AC092106.2-201ENST00000436597 487 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXN3O00409 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXN3O00409 COL11A2P1-205ENST00000441798 676 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 AC009237.1-201ENST00000442127 744 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXN3O00409 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXN3O00409 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXN3O00409 AC122714.1-201ENST00000502510 459 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 RNU6-760P-201ENST00000516078 97 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 RNU6-467P-201ENST00000517027 110 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXN3O00409 NPM1P52-201ENST00000518264 846 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
FOXN3O00409 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXN3O00409 RPL7AP69-201ENST00000595306 806 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 MIR6883-201ENST00000614952 78 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 AL445649.1-201ENST00000615941 691 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 AC011455.2-201ENST00000599320 3336 ntBASIC6.93□□□□□ -1.3
FOXN3O00409 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXN3O00409 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms