Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC087468.1-201ENST00000604365 630 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AC005972.3-201ENST00000606304 481 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AC092574.1-201ENST00000609771 420 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AC006924.1-201ENST00000610750 559 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AC069542.2-201ENST00000624816 216 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AL139254.3-201ENST00000641097 674 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AL359976.1-201ENST00000418655 3528 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AC007114.2-201ENST00000576014 4281 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 RNU6-891P-201ENST00000384280 111 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 SNORA40.4-201ENST00000390971 128 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 ZNF37CP-201ENST00000406795 241 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 RNA5SP155-201ENST00000411154 129 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AL139184.1-202ENST00000422303 222 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 RPS7P14-201ENST00000426405 583 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 NPM1P48-201ENST00000436002 853 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 MTCYBP14-201ENST00000457471 715 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AC063955.1-201ENST00000462872 685 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 RN7SL83P-201ENST00000468131 297 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AC008945.1-201ENST00000505144 499 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 RNA5SP96-201ENST00000516041 107 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AC009729.1-201ENST00000548873 1133 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 GMCL1P2-201ENST00000605230 823 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 RPL21P136-201ENST00000605378 396 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 SNORA35B-201ENST00000607417 129 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 HPVC1-201ENST00000629899 1198 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 SAMMSON-214ENST00000641395 1264 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 AC079753.1-201ENST00000623243 3868 ntBASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TCRBV7S3A2A0A539 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
TCRBV7S3A2A0A539 AC007998.4-201ENST00000612496 2533 ntBASIC6.4□□□□□ -1.39
TCRBV7S3A2A0A539 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
TCRBV7S3A2A0A539 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.4□□□□□ -1.39
TCRBV7S3A2A0A539 AC027279.1-201ENST00000568885 4284 ntBASIC6.4□□□□□ -1.39
TCRBV7S3A2A0A539 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
TCRBV7S3A2A0A539 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TCRBV7S3A2A0A539 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.4□□□□□ -1.39
TCRBV7S3A2A0A539 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
TCRBV7S3A2A0A539 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TCRBV7S3A2A0A539 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AL136984.1-201ENST00000607611 1893 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 OR52N3P-201ENST00000413417 934 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 SETP10-201ENST00000424368 814 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 GAPDHP37-201ENST00000442317 968 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 EIF3LP2-201ENST00000457262 807 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms