Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 RPL7AP69-201ENST00000595306 806 ntBASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 AC135178.6-201ENST00000605314 398 ntBASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 AC093635.1-201ENST00000609028 555 ntBASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 AL645927.2-201ENST00000618350 349 ntBASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 AP006248.3-201ENST00000623580 594 ntBASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 BX284613.1-201ENST00000452221 1641 ntBASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 AC122713.2-201ENST00000624942 3335 ntBASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A3BPQ9Y5P4 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC010894.1-201ENST00000313760 361 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 SNORA70.3-201ENST00000365075 132 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 SNORA7A-201ENST00000384765 139 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 RNA5SP105-201ENST00000391123 113 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC019178.1-201ENST00000392337 440 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 UBBP1-201ENST00000392399 473 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 Z82198.3-201ENST00000421145 199 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 PRUNEP1-201ENST00000425846 705 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC239367.3-201ENST00000428996 814 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 GAPDHP20-201ENST00000444107 1007 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 RPSAP37-201ENST00000470913 821 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 RPL9P15-201ENST00000491096 532 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 SUMO2P4-201ENST00000504193 276 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 PSMA2P2-201ENST00000504319 686 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC021087.2-201ENST00000504656 1203 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 RN7SKP196-201ENST00000516267 345 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 VTA1P2-201ENST00000520205 911 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 SNRPCP6-201ENST00000528310 210 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC084851.2-201ENST00000530377 364 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC007068.2-201ENST00000543168 395 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 DNAJC19P3-201ENST00000594491 331 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AL159169.2-201ENST00000610061 1269 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 OR1N1-202ENST00000619659 939 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 RBPJP6-201ENST00000411556 1431 ntBASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A3BPQ9Y5P4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC079949.2-201ENST00000617117 2933 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 MAPK10-270ENST00000641102 3538 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms