Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 RN7SKP189-201ENST00000365042 330 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC026310.1-201ENST00000396004 378 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 CDC42P6-201ENST00000421246 576 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 RPL12P11-201ENST00000439970 501 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 MEF2AP1-201ENST00000454867 863 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC104339.1-201ENST00000465478 348 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC093801.2-201ENST00000503966 1050 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC010460.2-201ENST00000509054 677 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 RNU6-319P-201ENST00000516025 108 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 OR9G2P-201ENST00000533326 880 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 OSBPL9P3-201ENST00000534523 595 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC121758.1-202ENST00000556917 658 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC023158.1-201ENST00000561632 1025 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 OR1N1-202ENST00000619659 939 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC079298.2-201ENST00000623885 459 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC007683.2-201ENST00000624681 714 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC093278.2-201ENST00000564956 2485 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 NEK2P4-201ENST00000425793 1329 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AL512310.3-201ENST00000547023 1335 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 MAPK10-383ENST00000642032 3390 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 RNA5SP308-201ENST00000362532 115 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 RNU6-650P-201ENST00000365658 111 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 ST13P16-201ENST00000401760 781 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 CYCSP17-201ENST00000407870 315 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AL663061.1-201ENST00000416625 580 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 GAPDHP57-201ENST00000424400 585 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 RPL34P27-201ENST00000428810 349 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 TIMM8BP2-201ENST00000445940 251 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 CCNJP1-201ENST00000450600 1149 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 RN7SL170P-201ENST00000487098 295 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 RN7SL37P-201ENST00000490461 307 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 MTCYBP44-201ENST00000514835 823 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 RNU6-1102P-201ENST00000516149 96 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AC087752.2-201ENST00000521219 281 ntBASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDHB1Q9Y5F3 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms