Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RPL7P58-201ENST00000402913 758 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 MTND2P9-201ENST00000422293 931 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AL354893.1-201ENST00000433735 348 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC104339.1-201ENST00000465478 348 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC106822.1-201ENST00000502647 526 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 HMGN1P16-201ENST00000508308 283 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC093664.1-201ENST00000511779 289 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 NDUFA5P11-201ENST00000567995 343 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC020978.7-201ENST00000575953 1187 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC010463.3-201ENST00000594077 500 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC092474.3-201ENST00000603022 568 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AP005131.7-201ENST00000610087 611 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AC074141.1-201ENST00000588129 2995 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 BX284613.1-201ENST00000452221 1641 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 MIR1282-201ENST00000408865 101 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 DUTP4-201ENST00000424782 475 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 BX119904.3-201ENST00000428194 957 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 ARMC4P1-201ENST00000438905 707 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AL020997.1-201ENST00000446554 349 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 TVP23CP1-201ENST00000450317 639 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 H3F3AP5-201ENST00000475267 429 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC021006.1-201ENST00000489849 553 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 RPS10P20-201ENST00000494130 463 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC091874.2-201ENST00000505889 720 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC112484.3-201ENST00000505910 329 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC018797.1-201ENST00000510791 255 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC106800.2-201ENST00000514009 1103 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 MAST4-IT1-201ENST00000514241 658 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 RNU4-18P-201ENST00000516751 149 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC026688.1-201ENST00000520639 1168 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 OR52K3P-201ENST00000531655 943 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC084121.1-201ENST00000533882 835 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 RPL41P2-201ENST00000544920 409 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC026956.1-201ENST00000558741 396 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 CTSLP2-201ENST00000580501 394 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AL499605.1-201ENST00000604628 403 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC091768.1-201ENST00000609258 930 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AL122023.1-201ENST00000622847 530 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 AC114546.4-201ENST00000624413 369 ntBASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SSX2IPQ9Y2D8 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms