Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC9.38□□□□□ -0.91
SCAPERQ9BY12 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC9.38□□□□□ -0.91
SCAPERQ9BY12 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
SCAPERQ9BY12 SNORA64.1-201ENST00000362600 132 ntBASIC9.38□□□□□ -0.91
SCAPERQ9BY12 RN7SKP162-201ENST00000363605 345 ntBASIC9.38□□□□□ -0.91
SCAPERQ9BY12 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC9.38□□□□□ -0.91
SCAPERQ9BY12 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC9.38□□□□□ -0.91
SCAPERQ9BY12 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC9.38□□□□□ -0.91
SCAPERQ9BY12 RN7SL466P-201ENST00000497546 295 ntBASIC9.38□□□□□ -0.91
SCAPERQ9BY12 AC106800.2-201ENST00000514009 1103 ntBASIC9.38□□□□□ -0.91
SCAPERQ9BY12 SNORA70.20-201ENST00000516848 126 ntBASIC9.38□□□□□ -0.91
SCAPERQ9BY12 CYCSP22-201ENST00000517555 339 ntBASIC9.38□□□□□ -0.91
SCAPERQ9BY12 AP004607.6-201ENST00000525033 1202 ntBASIC9.38□□□□□ -0.91
SCAPERQ9BY12 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC9.38□□□□□ -0.91
SCAPERQ9BY12 AL645933.2-201ENST00000606743 1207 ntBASIC9.38□□□□□ -0.91
SCAPERQ9BY12 AL136131.3-201ENST00000607600 188 ntBASIC9.38□□□□□ -0.91
SCAPERQ9BY12 AC016769.4-201ENST00000616893 535 ntBASIC9.38□□□□□ -0.91
SCAPERQ9BY12 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC9.38□□□□□ -0.91
SCAPERQ9BY12 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC9.38□□□□□ -0.91
SCAPERQ9BY12 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC9.38□□□□□ -0.91
SCAPERQ9BY12 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
SCAPERQ9BY12 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 CRP-204ENST00000368112 787 ntTSL 2 BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 AC073909.1-201ENST00000447112 999 ntBASIC9.37□□□□□ -0.91
SCAPERQ9BY12 EIF4A1P6-201ENST00000448133 1210 ntBASIC9.37□□□□□ -0.91
SCAPERQ9BY12 RN7SL269P-201ENST00000467795 305 ntBASIC9.37□□□□□ -0.91
SCAPERQ9BY12 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 COG2-209ENST00000534989 2963 ntTSL 2 BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 MIR193BHG-214ENST00000641765 509 ntBASIC9.37□□□□□ -0.91
SCAPERQ9BY12 AC010624.4-201ENST00000597606 1351 ntBASIC9.37□□□□□ -0.91
SCAPERQ9BY12 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 Z93929.1-201ENST00000418200 1475 ntBASIC9.37□□□□□ -0.91
SCAPERQ9BY12 WDR95P-201ENST00000425638 1542 ntBASIC9.37□□□□□ -0.91
SCAPERQ9BY12 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SCAPERQ9BY12 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 OR52B5P-204ENST00000641744 3467 ntBASIC9.36□□□□□ -0.91
SCAPERQ9BY12 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 LSM5-203ENST00000409782 649 ntTSL 5 BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 AC010343.2-201ENST00000510162 224 ntBASIC9.36□□□□□ -0.91
SCAPERQ9BY12 WBP1LP3-201ENST00000523033 208 ntBASIC9.36□□□□□ -0.91
SCAPERQ9BY12 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 AC091078.2-201ENST00000557145 559 ntBASIC9.36□□□□□ -0.91
SCAPERQ9BY12 AL356801.1-201ENST00000559320 294 ntBASIC9.36□□□□□ -0.91
SCAPERQ9BY12 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 AL035661.1-201ENST00000620459 1144 ntBASIC9.36□□□□□ -0.91
SCAPERQ9BY12 AL357562.1-201ENST00000624911 609 ntBASIC9.36□□□□□ -0.91
SCAPERQ9BY12 AC109780.1-201ENST00000451768 1344 ntBASIC9.36□□□□□ -0.91
SCAPERQ9BY12 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 AL008638.3-201ENST00000623027 5182 ntBASIC9.36□□□□□ -0.91
SCAPERQ9BY12 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 AC027279.4-201ENST00000624371 2072 ntBASIC9.36□□□□□ -0.91
SCAPERQ9BY12 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC9.36□□□□□ -0.91
SCAPERQ9BY12 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 AC235565.1-201ENST00000456962 1325 ntBASIC9.35□□□□□ -0.91
SCAPERQ9BY12 AC008171.1-201ENST00000395058 200 ntBASIC9.35□□□□□ -0.91
SCAPERQ9BY12 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 NANOGP4-201ENST00000427230 913 ntBASIC9.35□□□□□ -0.91
SCAPERQ9BY12 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 COPS8P2-201ENST00000473228 627 ntBASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms