Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF31Q96EP0 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 AHCYP8-201ENST00000425108 209 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF31Q96EP0 ETF1P1-206ENST00000427296 984 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 MYL6P3-201ENST00000436904 432 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 HMGN1P5-201ENST00000448591 263 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 RPS26P11-201ENST00000463445 348 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 AC083806.1-201ENST00000468934 316 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 RPS26P6-201ENST00000475156 348 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 OR7E22P-201ENST00000478335 1035 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 RN7SL654P-201ENST00000479178 292 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 AC096571.1-202ENST00000506634 735 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 AC093816.1-201ENST00000515076 913 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 MINOS1P4-201ENST00000515470 318 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 MTND2P32-201ENST00000521584 1038 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 AP003033.2-201ENST00000528901 805 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 SETP17-201ENST00000534163 817 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 NDUFB9P1-201ENST00000604683 510 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 AC073111.2-201ENST00000605657 1075 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 uc_338.29-201ENST00000615099 168 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 AP000943.4-201ENST00000622912 357 ntBASIC6.53□□□□□ -1.36
RNF31Q96EP0 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF31Q96EP0 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.53□□□□□ -1.36
RNF31Q96EP0 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
RNF31Q96EP0 RNF19BPY-201ENST00000458209 1550 ntBASIC6.52□□□□□ -1.36
RNF31Q96EP0 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
RNF31Q96EP0 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF31Q96EP0 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF31Q96EP0 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF31Q96EP0 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF31Q96EP0 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF31Q96EP0 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 RNU6-1017P-201ENST00000363613 106 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 SNORD94-201ENST00000386037 137 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC002069.1-201ENST00000429649 1159 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 MTATP6P26-201ENST00000445926 662 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 EEF1B2P3-201ENST00000447718 678 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 OR6C72P-201ENST00000451403 892 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 RN7SL83P-201ENST00000468131 297 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 RN7SL649P-201ENST00000496974 275 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 RN7SKP253-201ENST00000516424 309 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC087752.2-201ENST00000521219 281 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 MTND2P38-201ENST00000522536 667 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 IGKV2-4-201ENST00000523070 340 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC139103.1-201ENST00000534696 1030 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC026458.1-201ENST00000564330 438 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC020914.7-201ENST00000594477 545 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC091057.3-201ENST00000602684 733 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC135178.6-201ENST00000605314 398 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC005156.1-201ENST00000613371 573 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 AL356863.1-201ENST00000623378 1080 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC061999.1-201ENST00000624454 177 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC069542.2-201ENST00000624816 216 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC099654.9-201ENST00000637055 678 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 AL596275.2-207ENST00000641188 675 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms