Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 RPS4XP19-201ENST00000460237 736 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 AL133372.1-201ENST00000493565 745 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 AC090058.1-201ENST00000498788 435 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 AC010409.2-201ENST00000505780 478 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFT1Q96AA3 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 RN7SL270P-201ENST00000579643 281 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 AP001267.4-201ENST00000602598 545 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 AL049840.5-201ENST00000602827 552 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 AL356986.1-201ENST00000604085 341 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 MRPL57P1-201ENST00000621486 265 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 AC140479.4-205ENST00000636339 820 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFT1Q96AA3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFT1Q96AA3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFT1Q96AA3 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFT1Q96AA3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 GOT2P1-201ENST00000440922 1309 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFT1Q96AA3 AC116158.1-201ENST00000560231 2129 ntBASIC5.68□□□□□ -1.5
RFT1Q96AA3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFT1Q96AA3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.68□□□□□ -1.5
RFT1Q96AA3 MTCO1P22-201ENST00000604619 1360 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 RNF19BPY-201ENST00000458209 1550 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 NLRP3P1-201ENST00000622303 1785 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AL359976.1-201ENST00000418655 3528 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 MIR99A-201ENST00000384906 81 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 MRPS21P2-201ENST00000424704 264 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 RPL7AP71-201ENST00000451120 739 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 RNU6-943P-201ENST00000516960 98 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 IGKV1D-32-201ENST00000517449 318 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 OR4H6P-201ENST00000563771 921 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 RPS27AP19-201ENST00000597285 458 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 BUB1P1-201ENST00000603541 607 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 MRPL57P3-201ENST00000619218 176 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms