Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AC092865.4-201ENST00000477936 615 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 MIR4776-2-201ENST00000580204 80 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AC091544.5-201ENST00000620192 3815 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 ICK-201ENST00000350082 6116 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AL031651.1-201ENST00000615357 1438 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 MBP-206ENST00000397863 4800 ntTSL 3 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 TNPO1P1-201ENST00000423641 1138 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AZGP1P2-201ENST00000454506 345 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 HMGN2P6-201ENST00000551091 273 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AC012653.2-201ENST00000621880 420 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AC022893.2-201ENST00000564832 3296 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AL591848.4-201ENST00000567832 3472 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC245884.2-201ENST00000426257 404 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AL445928.1-201ENST00000435545 222 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AL390119.1-201ENST00000440329 312 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC092967.1-201ENST00000449016 481 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 OR5D15P-201ENST00000531671 942 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC087565.3-203ENST00000641018 837 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 TMEM75-201ENST00000624314 2165 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 RPA2P2-201ENST00000419698 796 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC079841.1-201ENST00000481228 950 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 RN7SL184P-201ENST00000488308 297 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 RN7SKP98-201ENST00000517070 156 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC126177.5-201ENST00000549599 178 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AF230666.2-201ENST00000602328 725 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 PPATP2-201ENST00000605635 508 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 EEF1A1P24-201ENST00000451469 1378 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms