Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SMG1P2-201ENST00000566127 4221 ntBASIC5.26□□□□□ -1.57
CCDC71LQ8N9Z2 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC71LQ8N9Z2 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC71LQ8N9Z2 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC71LQ8N9Z2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 RBPJP6-201ENST00000411556 1431 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AL445213.1-201ENST00000412589 747 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AC015977.1-201ENST00000418887 292 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 RPL12P16-201ENST00000431098 498 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AL365220.1-201ENST00000432923 399 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 RPL14P5-201ENST00000436474 730 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AC005517.1-201ENST00000452091 489 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 RPS12P20-201ENST00000464109 380 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AC018475.1-201ENST00000478358 465 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AL035690.1-201ENST00000490892 383 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 CYP4F27P-201ENST00000514557 494 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 SETP21-201ENST00000514799 892 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AC107993.1-201ENST00000591343 684 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AC012510.1-201ENST00000607946 759 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AL008723.3-201ENST00000608926 449 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 MIR6085-201ENST00000618314 110 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AC073869.7-201ENST00000640874 297 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 AC027279.4-201ENST00000624371 2072 ntBASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC71LQ8N9Z2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 AC074375.1-201ENST00000372993 192 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 MIR99A-201ENST00000384906 81 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 RNU11-201ENST00000387069 134 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 RN7SKP17-201ENST00000411242 351 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 SETP22-201ENST00000412243 957 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 ETF1P1-206ENST00000427296 984 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 RPS27AP3-201ENST00000453803 454 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 RN7SL91P-201ENST00000469313 291 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 AC025271.1-201ENST00000485045 429 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 Z99943.2-201ENST00000507585 266 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 MIR3189-201ENST00000578735 73 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 MIR5682-201ENST00000584864 76 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 AL360012.1-201ENST00000602813 131 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 AC019257.2-201ENST00000605539 497 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 AL121782.1-201ENST00000611242 413 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms