Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PPIAP27-201ENST00000453800 265 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 NXT1P1-201ENST00000458481 316 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AC026254.2-201ENST00000475295 371 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 PPIAP19-201ENST00000486414 492 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 OR7E99P-201ENST00000505750 922 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 RN7SKP98-201ENST00000517070 156 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 HNRNPRP2-201ENST00000528421 743 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 MEG8-217ENST00000556637 924 ntTSL 5 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AC090286.3-201ENST00000573133 187 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AC020765.1-201ENST00000604296 328 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AL080312.2-201ENST00000613001 630 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AC129915.3-201ENST00000634128 948 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 BRD7P6-201ENST00000431406 1860 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 SNORA51.9-201ENST00000384295 124 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 RPL5P20-201ENST00000403848 896 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 AC079355.1-201ENST00000421770 223 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 AC094019.1-201ENST00000434678 472 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 HLA-DPA3-207ENST00000454398 229 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 DEFB109A-201ENST00000482450 265 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 MTND3P6-201ENST00000485242 339 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 RNA5SP206-201ENST00000516703 121 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 MRPS21P8-201ENST00000569196 235 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 LINC00556-201ENST00000569603 412 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 AP000919.1-201ENST00000582850 985 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 GTF2IP6-201ENST00000583143 541 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 NPM1P45-201ENST00000583151 559 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 AL049840.5-201ENST00000602827 552 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 MIR6768-201ENST00000610734 72 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 MIR6085-201ENST00000618314 110 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 AC087269.2-201ENST00000641764 975 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 MTCO1P28-201ENST00000574177 1528 ntBASIC7.06□□□□□ -1.28
HERC6Q8IVU3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HERC6Q8IVU3 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
HERC6Q8IVU3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HERC6Q8IVU3 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.05□□□□□ -1.28
HERC6Q8IVU3 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HERC6Q8IVU3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.05□□□□□ -1.28
HERC6Q8IVU3 EIF3EP1-201ENST00000433978 1316 ntBASIC7.05□□□□□ -1.28
HERC6Q8IVU3 CIR1P2-201ENST00000514821 1342 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms