Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 AL713922.1-201ENST00000416477 747 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 AC090114.3-201ENST00000479267 829 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 RPL15P21-201ENST00000495592 567 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 AC106800.2-201ENST00000514009 1103 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 AC133644.2-201ENST00000608142 540 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 AP002505.2-201ENST00000623585 696 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 OR11H2-202ENST00000641517 1085 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 U3.36-201ENST00000408418 213 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 NMD3P2-201ENST00000421815 761 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 PRUNEP1-201ENST00000425846 705 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 SDC4P-201ENST00000453285 601 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC011379.1-201ENST00000508713 3025 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC110048.2-201ENST00000617013 6721 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC004158.1-201ENST00000564508 4319 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 RN7SKP279-201ENST00000411383 298 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 SRSF1P1-201ENST00000424058 520 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 RPL7P56-201ENST00000429441 717 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 RPL31P44-201ENST00000447680 377 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC015864.1-201ENST00000496512 544 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 HMGB1P42-201ENST00000532126 553 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AL512310.9-201ENST00000553311 948 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC114786.1-201ENST00000512892 1415 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 ZAN-206ENST00000618565 8651 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS13CQ709C8 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 BX119917.1-201ENST00000432517 502 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC095057.1-201ENST00000507583 168 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 CYCSP22-201ENST00000517555 339 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 HSPE1P2-201ENST00000554777 306 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AL133406.3-201ENST00000606817 541 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 PPIP5K1-203ENST00000360135 5559 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 PPIP5K1-204ENST00000360301 5565 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 AC013488.1-201ENST00000526618 1838 ntBASIC4.86□□□□□ -1.63
VPS13CQ709C8 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS13CQ709C8 ZNF969P-201ENST00000510345 2341 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms