Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC099654.15-201ENST00000639802 509 ntBASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 AL022323.4-201ENST00000623980 13120 ntBASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 AC005225.5-201ENST00000623547 2225 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 HSPD1P8-201ENST00000400121 1658 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 OR11H13P-201ENST00000359695 979 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 SNORA70H-201ENST00000383910 135 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 SNORA70J-201ENST00000384182 135 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AL050335.1-201ENST00000396909 869 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC083862.1-201ENST00000427378 1242 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 VN1R53P-201ENST00000429536 957 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 GAPDHP75-201ENST00000433910 943 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AL022324.2-201ENST00000434827 780 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 RPL31P11-202ENST00000454082 372 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 HMGN1P8-201ENST00000463578 288 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 RN7SL267P-201ENST00000485107 261 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC022415.1-202ENST00000486612 523 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 RPL19P11-201ENST00000495944 589 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 NPM1P27-201ENST00000502784 830 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC114324.2-202ENST00000503812 134 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 SUMO2P4-201ENST00000504193 276 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC093870.1-201ENST00000506837 213 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC110056.1-201ENST00000525759 911 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC073916.1-201ENST00000545095 130 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 RN7SL208P-201ENST00000577964 296 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 RNU6-84P-201ENST00000607737 102 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC007671.1-201ENST00000616957 830 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 MIR7854-201ENST00000620068 65 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC068769.1-201ENST00000474767 2426 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC092111.2-201ENST00000611627 1414 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 AC006511.3-201ENST00000624929 1783 ntBASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.8□□□□□ -1.48
NHLRC1Q6VVB1 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 339.9 ms