Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 ABCA11P-202ENST00000504019 2110 ntBASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 RNU1-65P-201ENST00000363919 148 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 RN7SKP187-201ENST00000365536 330 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 MIR188-201ENST00000385034 86 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 YWHAZP6-201ENST00000399764 738 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 RNA5SP198-201ENST00000410376 127 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 RPL23AP18-201ENST00000416139 468 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AC118758.1-202ENST00000454719 225 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AC115223.1-201ENST00000466377 870 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AC021006.1-201ENST00000489849 553 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 RPL37P23-201ENST00000492641 294 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AC091965.3-201ENST00000506236 208 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 HMGN1P17-201ENST00000513734 295 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AL078601.3-201ENST00000573303 535 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AC004232.2-201ENST00000574245 821 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 RPSAP75-201ENST00000605848 301 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 uc_338.31-201ENST00000615595 186 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AC006213.6-201ENST00000623722 4179 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 AC074141.1-201ENST00000588129 2995 ntBASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFWD3Q6PCD5 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 SNORD16-201ENST00000362803 99 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 SNORA70.9-201ENST00000384370 135 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 RNA5SP115-201ENST00000411160 107 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 EMC3-AS1-205ENST00000438698 534 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 OR52E7P-201ENST00000452394 933 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 SETP4-201ENST00000455717 868 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AC092824.1-201ENST00000483524 576 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 OR9A1P-202ENST00000484361 945 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 RN7SL362P-201ENST00000494228 267 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AC018797.1-201ENST00000510791 255 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 ZNF519P4-201ENST00000514008 125 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AL352984.2-201ENST00000611153 546 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AL352984.2-202ENST00000613699 155 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 MIR6811-201ENST00000620409 58 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 OR7E91P-202ENST00000642062 1198 ntBASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RFWD3Q6PCD5 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms