Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC020763.5-201ENST00000623298 430 ntBASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 AP003119.3-201ENST00000566747 4192 ntBASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.27□□□□□ -1.4
LYSMD4Q5XG99 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 SYT14P1-202ENST00000600441 1448 ntBASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 MIR541-201ENST00000401360 84 ntBASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 NPM1P19-201ENST00000450070 712 ntBASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 RN7SL177P-201ENST00000476596 299 ntBASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 RPS4XP14-201ENST00000493072 781 ntBASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 AC063943.2-201ENST00000495697 534 ntBASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 MIR4443-201ENST00000585052 53 ntBASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 AC068768.2-201ENST00000602352 343 ntBASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 UGT2B25P-201ENST00000511504 1586 ntBASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.27□□□□□ -1.41
LYSMD4Q5XG99 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 RNU1-134P-201ENST00000362935 165 ntBASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 OR3D1P-201ENST00000438288 955 ntBASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 AC002553.3-201ENST00000453002 341 ntBASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 Y_RNA.667-201ENST00000516212 107 ntBASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 AC116631.1-202ENST00000640984 683 ntBASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
LYSMD4Q5XG99 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
LYSMD4Q5XG99 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
LYSMD4Q5XG99 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LYSMD4Q5XG99 AC008627.1-201ENST00000517511 1704 ntBASIC6.25□□□□□ -1.41
LYSMD4Q5XG99 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LYSMD4Q5XG99 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LYSMD4Q5XG99 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC6.25□□□□□ -1.41
LYSMD4Q5XG99 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms