Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC024451.4-201ENST00000602578 752 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 AC092960.1-201ENST00000604762 351 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 AC091167.5-201ENST00000605689 894 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN1BQ07699 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN1BQ07699 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SCN1BQ07699 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SCN1BQ07699 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN1BQ07699 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN1BQ07699 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN1BQ07699 AL591135.1-201ENST00000401578 5914 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.76□□□□□ -1.49
SCN1BQ07699 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SCN1BQ07699 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.76□□□□□ -1.49
SCN1BQ07699 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.76□□□□□ -1.49
SCN1BQ07699 NPM1P31-201ENST00000399021 764 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 AL121977.1-201ENST00000401636 979 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.76□□□□□ -1.49
SCN1BQ07699 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.76□□□□□ -1.49
SCN1BQ07699 MYL6P3-201ENST00000436904 432 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 CR391992.1-201ENST00000438601 394 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 AC009518.3-201ENST00000438972 253 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.76□□□□□ -1.49
SCN1BQ07699 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.76□□□□□ -1.49
SCN1BQ07699 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.76□□□□□ -1.49
SCN1BQ07699 RN7SL456P-201ENST00000469290 295 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 RPL23AP68-201ENST00000480924 445 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 HMGB3P14-201ENST00000494195 599 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 RN7SL187P-201ENST00000495587 303 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 AL135933.1-201ENST00000498657 802 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.76□□□□□ -1.49
SCN1BQ07699 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.76□□□□□ -1.49
SCN1BQ07699 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.76□□□□□ -1.49
SCN1BQ07699 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.76□□□□□ -1.49
SCN1BQ07699 RN7SKP242-201ENST00000515967 289 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 RNU6-751P-201ENST00000516382 101 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 AP002981.1-201ENST00000517692 975 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.76□□□□□ -1.49
SCN1BQ07699 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.76□□□□□ -1.49
SCN1BQ07699 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.76□□□□□ -1.49
SCN1BQ07699 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.76□□□□□ -1.49
SCN1BQ07699 LINC00556-201ENST00000569603 412 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 CTSLP2-201ENST00000580501 394 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 MIR4786-201ENST00000583954 80 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AC004908.1-201ENST00000606572 541 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 AC004241.2-201ENST00000614562 444 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 AL590410.1-201ENST00000617925 333 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.76□□□□□ -1.49
SCN1BQ07699 AL121936.2-201ENST00000641935 662 ntBASIC5.76□□□□□ -1.49
SCN1BQ07699 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
SCN1BQ07699 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SCN1BQ07699 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SCN1BQ07699 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
SCN1BQ07699 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.76□□□□□ -1.49
SCN1BQ07699 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SCN1BQ07699 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SCN1BQ07699 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SCN1BQ07699 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.76□□□□□ -1.49
SCN1BQ07699 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN1BQ07699 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SCN1BQ07699 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms