Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNA5SP115-201ENST00000411160 107 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 MTND1P10-201ENST00000426108 832 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 SNX18P26-201ENST00000458433 740 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC099340.1-201ENST00000475247 599 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC114728.1-201ENST00000488289 483 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 ASNSP4-201ENST00000511103 447 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 OR52H2P-201ENST00000514607 902 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC093878.1-201ENST00000515630 432 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC096661.1-201ENST00000515870 822 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC073916.1-201ENST00000545095 130 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 MED31-202ENST00000574128 619 ntTSL 3 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 RN7SL208P-201ENST00000577964 296 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC023206.1-201ENST00000605824 298 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC093635.1-201ENST00000609028 555 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC005355.2-201ENST00000625064 484 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC027559.1-201ENST00000636288 271 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC095038.1-201ENST00000429248 1591 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 PSMC1P4-201ENST00000515236 1327 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 CREM-203ENST00000344351 1625 ntTSL 2 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC020633.1-201ENST00000468439 2247 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 EEF1A1P9-201ENST00000514975 1383 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AL137141.1-201ENST00000624622 4836 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 CREM-217ENST00000439705 2306 ntTSL 5 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 GLYATL1P1-201ENST00000528297 1607 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 TMA16P2-201ENST00000413187 601 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AL354868.1-201ENST00000417077 482 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 RPL18AP14-201ENST00000417685 526 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AL672212.1-201ENST00000422246 400 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 SPATA20P1-201ENST00000423089 438 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AHCYP8-201ENST00000425108 209 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AL138479.1-201ENST00000426913 484 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 OR13K1P-201ENST00000444577 975 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 RPL5P10-201ENST00000445207 894 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 SLC25A51P1-201ENST00000468432 871 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 RN7SL37P-201ENST00000490461 307 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 CFI-204ENST00000510800 667 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 GNG2-203ENST00000553432 577 ntTSL 4 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AC233702.7-202ENST00000582941 211 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AC090241.1-201ENST00000587732 621 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AC010487.1-201ENST00000594408 1172 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 RPS11-205ENST00000599561 430 ntTSL 5 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AC091133.5-201ENST00000603088 301 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 MIR8082-201ENST00000612488 81 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 MIR6737-201ENST00000617385 70 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 MIR7854-201ENST00000620068 65 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AP003108.4-201ENST00000623917 878 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms