Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 AC079922.1-201ENST00000443291 359 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 RN7SL393P-201ENST00000463588 296 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 SLC25A51P1-201ENST00000468432 871 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 AC015524.1-201ENST00000491585 472 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 RN7SL612P-201ENST00000497704 295 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 RPL41P2-201ENST00000544920 409 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 ARGFXP2-201ENST00000579304 949 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 MIR4732-201ENST00000581873 76 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGCS1Q01581 AC005479.3-201ENST00000602790 431 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 AL589743.6-201ENST00000611025 117 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGCS1Q01581 AC116667.2-201ENST00000641075 823 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 AC005225.5-201ENST00000623547 2225 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 HDAC1P2-201ENST00000453661 1398 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGCS1Q01581 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.02□□□□□ -1.44
HMGCS1Q01581 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.44
HMGCS1Q01581 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
HMGCS1Q01581 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC073365.1-203ENST00000641055 1992 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGCS1Q01581 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 RN7SKP184-201ENST00000362348 333 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 RNU4-64P-201ENST00000410795 131 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 GTF3AP6-201ENST00000432585 986 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 COX4I1P2-201ENST00000447446 547 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 RANP2-201ENST00000456833 229 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC073594.1-201ENST00000462065 364 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC010343.2-201ENST00000510162 224 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 AP001804.1-201ENST00000526868 919 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC007494.1-201ENST00000562293 760 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC018558.5-201ENST00000565840 952 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 NPIPB1P-202ENST00000588786 828 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC068726.1-201ENST00000610993 341 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 HTR1DP1-201ENST00000616500 888 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 AP003789.1-201ENST00000617737 605 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC003992.1-201ENST00000635364 557 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 OR7E91P-202ENST00000642062 1198 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC009135.2-201ENST00000624136 1768 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HMGCS1Q01581 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS1Q01581 AC217777.1-201ENST00000570034 1471 ntBASIC6.02□□□□□ -1.45
HMGCS1Q01581 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGCS1Q01581 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGCS1Q01581 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 AP004289.1-201ENST00000436307 2205 ntBASIC6.01□□□□□ -1.45
HMGCS1Q01581 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS1Q01581 AC003045.1-201ENST00000398779 713 ntBASIC6.01□□□□□ -1.45
HMGCS1Q01581 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 GAPDHP19-201ENST00000431768 1005 ntBASIC6.01□□□□□ -1.45
HMGCS1Q01581 AC128677.1-201ENST00000436016 442 ntBASIC6.01□□□□□ -1.45
HMGCS1Q01581 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 RN7SL369P-201ENST00000477138 299 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms