Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.17□□□□□ -1.42
RAE1P78406 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 Z93929.1-201ENST00000418200 1475 ntBASIC6.17□□□□□ -1.42
RAE1P78406 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
RAE1P78406 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
RAE1P78406 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.17□□□□□ -1.42
RAE1P78406 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RAE1P78406 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RAE1P78406 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RAE1P78406 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
RAE1P78406 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RAE1P78406 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RAE1P78406 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RAE1P78406 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RAE1P78406 RNA5SP308-201ENST00000362532 115 ntBASIC6.17□□□□□ -1.42
RAE1P78406 RNU1-5P-201ENST00000362684 144 ntBASIC6.17□□□□□ -1.42
RAE1P78406 MRPS6P2-201ENST00000381143 370 ntBASIC6.17□□□□□ -1.42
RAE1P78406 RNU6-925P-201ENST00000384629 104 ntBASIC6.17□□□□□ -1.42
RAE1P78406 AC026310.1-201ENST00000396004 378 ntBASIC6.17□□□□□ -1.42
RAE1P78406 AL589994.1-201ENST00000404962 340 ntBASIC6.17□□□□□ -1.42
RAE1P78406 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.17□□□□□ -1.42
RAE1P78406 AC019205.1-201ENST00000421830 730 ntBASIC6.17□□□□□ -1.42
RAE1P78406 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.17□□□□□ -1.42
RAE1P78406 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.17□□□□□ -1.42
RAE1P78406 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.17□□□□□ -1.42
RAE1P78406 AC003989.1-201ENST00000434569 565 ntBASIC6.17□□□□□ -1.42
RAE1P78406 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.17□□□□□ -1.42
RAE1P78406 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.17□□□□□ -1.42
RAE1P78406 HMGN1P32-201ENST00000441744 256 ntBASIC6.17□□□□□ -1.42
RAE1P78406 AL355355.1-201ENST00000442900 793 ntBASIC6.17□□□□□ -1.42
RAE1P78406 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.17□□□□□ -1.42
RAE1P78406 AKR1D1P1-201ENST00000457236 936 ntBASIC6.17□□□□□ -1.42
RAE1P78406 EIF3LP2-201ENST00000457262 807 ntBASIC6.17□□□□□ -1.42
RAE1P78406 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.17□□□□□ -1.42
RAE1P78406 AC022206.1-201ENST00000495947 347 ntBASIC6.17□□□□□ -1.42
RAE1P78406 AC091965.3-201ENST00000506236 208 ntBASIC6.17□□□□□ -1.42
RAE1P78406 OR51A1P-201ENST00000511110 946 ntBASIC6.17□□□□□ -1.42
RAE1P78406 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.17□□□□□ -1.42
RAE1P78406 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.17□□□□□ -1.42
RAE1P78406 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.17□□□□□ -1.42
RAE1P78406 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.17□□□□□ -1.42
RAE1P78406 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.17□□□□□ -1.42
RAE1P78406 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.17□□□□□ -1.42
RAE1P78406 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.17□□□□□ -1.42
RAE1P78406 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.17□□□□□ -1.42
RAE1P78406 AC024255.1-201ENST00000614376 102 ntBASIC6.17□□□□□ -1.42
RAE1P78406 U1.41-201ENST00000617626 165 ntBASIC6.17□□□□□ -1.42
RAE1P78406 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.17□□□□□ -1.42
RAE1P78406 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.17□□□□□ -1.42
RAE1P78406 AC009452.1-201ENST00000640823 606 ntBASIC6.17□□□□□ -1.42
RAE1P78406 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
RAE1P78406 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 SAGE3P-201ENST00000619800 1635 ntBASIC6.17□□□□□ -1.42
RAE1P78406 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.17□□□□□ -1.42
RAE1P78406 FANCD2P2-201ENST00000437591 1400 ntBASIC6.16□□□□□ -1.42
RAE1P78406 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAE1P78406 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.16□□□□□ -1.42
RAE1P78406 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAE1P78406 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.16□□□□□ -1.42
RAE1P78406 DOCK11P1-201ENST00000553480 5932 ntBASIC6.16□□□□□ -1.42
RAE1P78406 AC092646.2-201ENST00000431242 2095 ntBASIC6.16□□□□□ -1.42
RAE1P78406 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RAE1P78406 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAE1P78406 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RAE1P78406 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RAE1P78406 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.16□□□□□ -1.42
RAE1P78406 AC092634.1-201ENST00000366505 199 ntBASIC6.16□□□□□ -1.42
RAE1P78406 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RAE1P78406 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RAE1P78406 MIR620-201ENST00000385232 95 ntBASIC6.16□□□□□ -1.42
RAE1P78406 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
RAE1P78406 AMZ2P2-201ENST00000406819 1057 ntBASIC6.16□□□□□ -1.42
RAE1P78406 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.16□□□□□ -1.42
RAE1P78406 RNA5SP231-201ENST00000410496 138 ntBASIC6.16□□□□□ -1.42
RAE1P78406 U3.43-201ENST00000410734 213 ntBASIC6.16□□□□□ -1.42
RAE1P78406 RNA5SP115-201ENST00000411160 107 ntBASIC6.16□□□□□ -1.42
RAE1P78406 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.16□□□□□ -1.42
RAE1P78406 RANP6-201ENST00000413691 644 ntBASIC6.16□□□□□ -1.42
RAE1P78406 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.16□□□□□ -1.42
RAE1P78406 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.16□□□□□ -1.42
RAE1P78406 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.16□□□□□ -1.42
RAE1P78406 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.16□□□□□ -1.42
RAE1P78406 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.16□□□□□ -1.42
RAE1P78406 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.16□□□□□ -1.42
RAE1P78406 AC092106.2-201ENST00000436597 487 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms