Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
UBA52P62987 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.55□□□□□ -1.52
UBA52P62987 ZNF101P1-201ENST00000435701 1720 ntBASIC5.55□□□□□ -1.52
UBA52P62987 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 RNU1-65P-201ENST00000363919 148 ntBASIC5.55□□□□□ -1.52
UBA52P62987 RNA5SP232-201ENST00000364144 119 ntBASIC5.55□□□□□ -1.52
UBA52P62987 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.55□□□□□ -1.52
UBA52P62987 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.55□□□□□ -1.52
UBA52P62987 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.55□□□□□ -1.52
UBA52P62987 VN1R53P-201ENST00000429536 957 ntBASIC5.55□□□□□ -1.52
UBA52P62987 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.55□□□□□ -1.52
UBA52P62987 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.55□□□□□ -1.52
UBA52P62987 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 AC007383.1-201ENST00000445875 636 ntBASIC5.55□□□□□ -1.52
UBA52P62987 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.55□□□□□ -1.52
UBA52P62987 RN7SL654P-201ENST00000479178 292 ntBASIC5.55□□□□□ -1.52
UBA52P62987 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.55□□□□□ -1.52
UBA52P62987 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.55□□□□□ -1.52
UBA52P62987 GUSBP9-201ENST00000510138 584 ntBASIC5.55□□□□□ -1.52
UBA52P62987 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.55□□□□□ -1.52
UBA52P62987 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.55□□□□□ -1.52
UBA52P62987 RN7SKP196-201ENST00000516267 345 ntBASIC5.55□□□□□ -1.52
UBA52P62987 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.55□□□□□ -1.52
UBA52P62987 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.55□□□□□ -1.52
UBA52P62987 OR52K3P-201ENST00000531655 943 ntBASIC5.55□□□□□ -1.52
UBA52P62987 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.55□□□□□ -1.52
UBA52P62987 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.55□□□□□ -1.52
UBA52P62987 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.55□□□□□ -1.52
UBA52P62987 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.55□□□□□ -1.52
UBA52P62987 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.55□□□□□ -1.52
UBA52P62987 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.55□□□□□ -1.52
UBA52P62987 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.55□□□□□ -1.52
UBA52P62987 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.55□□□□□ -1.52
UBA52P62987 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.55□□□□□ -1.52
UBA52P62987 uc_338.29-201ENST00000615099 168 ntBASIC5.55□□□□□ -1.52
UBA52P62987 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.55□□□□□ -1.52
UBA52P62987 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.55□□□□□ -1.52
UBA52P62987 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
UBA52P62987 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
UBA52P62987 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 AC020658.2-201ENST00000559030 4020 ntBASIC5.55□□□□□ -1.52
UBA52P62987 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
UBA52P62987 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UBA52P62987 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
UBA52P62987 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
UBA52P62987 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.54□□□□□ -1.52
UBA52P62987 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.54□□□□□ -1.52
UBA52P62987 AC005725.1-201ENST00000577346 2607 ntBASIC5.54□□□□□ -1.52
UBA52P62987 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
UBA52P62987 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
UBA52P62987 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
UBA52P62987 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
UBA52P62987 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
UBA52P62987 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.54□□□□□ -1.52
UBA52P62987 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
UBA52P62987 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
UBA52P62987 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
UBA52P62987 GNG5P2-201ENST00000372054 207 ntBASIC5.54□□□□□ -1.52
UBA52P62987 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.54□□□□□ -1.52
UBA52P62987 RN7SKP161-201ENST00000411110 305 ntBASIC5.54□□□□□ -1.52
UBA52P62987 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.54□□□□□ -1.52
UBA52P62987 RPL7AP14-201ENST00000424041 802 ntBASIC5.54□□□□□ -1.52
UBA52P62987 AL139158.1-201ENST00000424719 340 ntBASIC5.54□□□□□ -1.52
UBA52P62987 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.54□□□□□ -1.52
UBA52P62987 AL390879.1-201ENST00000439143 386 ntBASIC5.54□□□□□ -1.52
UBA52P62987 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
UBA52P62987 RPL34P34-201ENST00000465389 354 ntBASIC5.54□□□□□ -1.52
UBA52P62987 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.54□□□□□ -1.52
UBA52P62987 RN7SL382P-201ENST00000482631 282 ntBASIC5.54□□□□□ -1.52
UBA52P62987 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.54□□□□□ -1.52
UBA52P62987 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.54□□□□□ -1.52
UBA52P62987 AC007537.1-201ENST00000539347 327 ntBASIC5.54□□□□□ -1.52
UBA52P62987 AP000619.2-201ENST00000546014 969 ntBASIC5.54□□□□□ -1.52
UBA52P62987 NPM1P5-201ENST00000557228 838 ntBASIC5.54□□□□□ -1.52
UBA52P62987 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.54□□□□□ -1.52
UBA52P62987 AC012175.1-201ENST00000603755 531 ntBASIC5.54□□□□□ -1.52
UBA52P62987 AC068726.1-201ENST00000610993 341 ntBASIC5.54□□□□□ -1.52
UBA52P62987 AP005212.3-201ENST00000619964 528 ntBASIC5.54□□□□□ -1.52
UBA52P62987 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.54□□□□□ -1.52
UBA52P62987 AC089999.3-201ENST00000622440 577 ntBASIC5.54□□□□□ -1.52
UBA52P62987 AL683826.1-201ENST00000624104 627 ntBASIC5.54□□□□□ -1.52
UBA52P62987 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.54□□□□□ -1.52
UBA52P62987 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.54□□□□□ -1.52
UBA52P62987 AL353763.1-201ENST00000624467 1628 ntBASIC5.54□□□□□ -1.52
UBA52P62987 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
UBA52P62987 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.54□□□□□ -1.52
UBA52P62987 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
UBA52P62987 AL049634.1-201ENST00000453770 1720 ntBASIC5.54□□□□□ -1.52
UBA52P62987 AC010132.4-201ENST00000569883 1368 ntBASIC5.54□□□□□ -1.52
UBA52P62987 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms