Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SLC1A1P43005 RPL31P11-202ENST00000454082 372 ntBASIC6.56□□□□□ -1.36
SLC1A1P43005 AL445687.2-201ENST00000458156 728 ntBASIC6.56□□□□□ -1.36
SLC1A1P43005 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.56□□□□□ -1.36
SLC1A1P43005 AP003385.3-201ENST00000472498 287 ntBASIC6.56□□□□□ -1.36
SLC1A1P43005 AC114324.2-202ENST00000503812 134 ntBASIC6.56□□□□□ -1.36
SLC1A1P43005 AC093664.1-201ENST00000511779 289 ntBASIC6.56□□□□□ -1.36
SLC1A1P43005 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SLC1A1P43005 RNA5SP418-201ENST00000515951 117 ntBASIC6.56□□□□□ -1.36
SLC1A1P43005 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SLC1A1P43005 OR9G2P-201ENST00000533326 880 ntBASIC6.56□□□□□ -1.36
SLC1A1P43005 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.56□□□□□ -1.36
SLC1A1P43005 RPL41P2-201ENST00000544920 409 ntBASIC6.56□□□□□ -1.36
SLC1A1P43005 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.56□□□□□ -1.36
SLC1A1P43005 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.56□□□□□ -1.36
SLC1A1P43005 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.56□□□□□ -1.36
SLC1A1P43005 AC026898.1-201ENST00000586404 571 ntBASIC6.56□□□□□ -1.36
SLC1A1P43005 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.56□□□□□ -1.36
SLC1A1P43005 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.56□□□□□ -1.36
SLC1A1P43005 MIR6070-201ENST00000613967 103 ntBASIC6.56□□□□□ -1.36
SLC1A1P43005 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.56□□□□□ -1.36
SLC1A1P43005 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.56□□□□□ -1.36
SLC1A1P43005 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.56□□□□□ -1.36
SLC1A1P43005 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SLC1A1P43005 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.56□□□□□ -1.36
SLC1A1P43005 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SLC1A1P43005 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SLC1A1P43005 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.56□□□□□ -1.36
SLC1A1P43005 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SLC1A1P43005 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SLC1A1P43005 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.56□□□□□ -1.36
SLC1A1P43005 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SLC1A1P43005 IMMTP1-201ENST00000435590 2219 ntBASIC6.56□□□□□ -1.36
SLC1A1P43005 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SLC1A1P43005 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.55□□□□□ -1.36
SLC1A1P43005 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.55□□□□□ -1.36
SLC1A1P43005 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.55□□□□□ -1.36
SLC1A1P43005 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SLC1A1P43005 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.55□□□□□ -1.36
SLC1A1P43005 EMC3-AS1-205ENST00000438698 534 ntBASIC6.55□□□□□ -1.36
SLC1A1P43005 HMGN1P32-201ENST00000441744 256 ntBASIC6.55□□□□□ -1.36
SLC1A1P43005 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.55□□□□□ -1.36
SLC1A1P43005 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.55□□□□□ -1.36
SLC1A1P43005 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.55□□□□□ -1.36
SLC1A1P43005 RN7SL369P-201ENST00000477138 299 ntBASIC6.55□□□□□ -1.36
SLC1A1P43005 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.55□□□□□ -1.36
SLC1A1P43005 KHDC1P1-201ENST00000511053 508 ntBASIC6.55□□□□□ -1.36
SLC1A1P43005 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.55□□□□□ -1.36
SLC1A1P43005 AC008055.1-201ENST00000547032 609 ntBASIC6.55□□□□□ -1.36
SLC1A1P43005 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.55□□□□□ -1.36
SLC1A1P43005 AC090774.2-201ENST00000584708 322 ntBASIC6.55□□□□□ -1.36
SLC1A1P43005 GLYATL1P2-202ENST00000588046 902 ntBASIC6.55□□□□□ -1.36
SLC1A1P43005 AC036176.3-201ENST00000602456 418 ntBASIC6.55□□□□□ -1.36
SLC1A1P43005 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.55□□□□□ -1.36
SLC1A1P43005 AC091059.2-201ENST00000623355 614 ntBASIC6.55□□□□□ -1.36
SLC1A1P43005 AC068213.1-201ENST00000625124 226 ntBASIC6.55□□□□□ -1.36
SLC1A1P43005 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.55□□□□□ -1.36
SLC1A1P43005 AC093297.3-201ENST00000607056 2517 ntBASIC6.55□□□□□ -1.36
SLC1A1P43005 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.55□□□□□ -1.36
SLC1A1P43005 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SLC1A1P43005 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
SLC1A1P43005 AC114876.1-201ENST00000490962 1366 ntBASIC6.55□□□□□ -1.36
SLC1A1P43005 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SLC1A1P43005 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.55□□□□□ -1.36
SLC1A1P43005 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
SLC1A1P43005 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SLC1A1P43005 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SLC1A1P43005 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SLC1A1P43005 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SLC1A1P43005 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.54□□□□□ -1.36
SLC1A1P43005 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SLC1A1P43005 MIR1266-201ENST00000408125 84 ntBASIC6.54□□□□□ -1.36
SLC1A1P43005 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC1A1P43005 RPS26P38-201ENST00000414476 348 ntBASIC6.54□□□□□ -1.36
SLC1A1P43005 GPN3P1-201ENST00000423883 535 ntBASIC6.54□□□□□ -1.36
SLC1A1P43005 AC245884.2-201ENST00000426257 404 ntBASIC6.54□□□□□ -1.36
SLC1A1P43005 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC1A1P43005 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.54□□□□□ -1.36
SLC1A1P43005 GTF3AP6-201ENST00000432585 986 ntBASIC6.54□□□□□ -1.36
SLC1A1P43005 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC1A1P43005 AC112187.1-201ENST00000455837 479 ntBASIC6.54□□□□□ -1.36
SLC1A1P43005 RN7SL790P-201ENST00000474043 298 ntBASIC6.54□□□□□ -1.36
SLC1A1P43005 RPL12P31-201ENST00000478433 450 ntBASIC6.54□□□□□ -1.36
SLC1A1P43005 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.54□□□□□ -1.36
SLC1A1P43005 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms