Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.98□□□□□ -1.13
COL15A1P39059 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 AP000866.6-201ENST00000638898 3579 ntBASIC7.98□□□□□ -1.13
COL15A1P39059 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.97□□□□□ -1.13
COL15A1P39059 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 TMSB4XP2-201ENST00000335179 210 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 RNFT1P3-201ENST00000340898 1052 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.97□□□□□ -1.13
COL15A1P39059 MGAT2P1-201ENST00000449718 797 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 ACA64.1-201ENST00000459171 127 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.97□□□□□ -1.13
COL15A1P39059 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.97□□□□□ -1.13
COL15A1P39059 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC092121.1-201ENST00000569452 202 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC090236.2-201ENST00000587933 1101 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 AC008555.7-201ENST00000605008 583 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 AC022106.1-201ENST00000612834 766 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC073488.3-201ENST00000631611 778 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.97□□□□□ -1.13
COL15A1P39059 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.97□□□□□ -1.13
COL15A1P39059 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.97□□□□□ -1.13
COL15A1P39059 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
COL15A1P39059 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
COL15A1P39059 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.97□□□□□ -1.13
COL15A1P39059 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.97□□□□□ -1.13
COL15A1P39059 AP002370.1-201ENST00000528055 1602 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 AL136531.3-201ENST00000624378 3658 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
COL15A1P39059 MIR323A-201ENST00000362199 86 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 RNU1-134P-201ENST00000362935 165 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
COL15A1P39059 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.97□□□□□ -1.13
COL15A1P39059 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.97□□□□□ -1.13
COL15A1P39059 NPM1P19-201ENST00000450070 712 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 AC090958.1-201ENST00000511122 351 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC090022.1-201ENST00000546569 311 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.97□□□□□ -1.13
COL15A1P39059 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC233702.7-202ENST00000582941 211 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 AL008723.3-201ENST00000608926 449 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 AP005431.1-201ENST00000618479 319 ntBASIC7.97□□□□□ -1.13
COL15A1P39059 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.97□□□□□ -1.13
COL15A1P39059 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.97□□□□□ -1.13
COL15A1P39059 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.97□□□□□ -1.13
COL15A1P39059 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
COL15A1P39059 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
COL15A1P39059 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.96□□□□□ -1.13
COL15A1P39059 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
COL15A1P39059 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.96□□□□□ -1.14
COL15A1P39059 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.96□□□□□ -1.14
COL15A1P39059 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
COL15A1P39059 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.14
COL15A1P39059 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
COL15A1P39059 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
COL15A1P39059 RNU1-49P-201ENST00000363468 159 ntBASIC7.96□□□□□ -1.14
COL15A1P39059 RNA5SP242-201ENST00000364171 118 ntBASIC7.96□□□□□ -1.14
COL15A1P39059 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.96□□□□□ -1.14
COL15A1P39059 AL132875.1-201ENST00000403623 949 ntBASIC7.96□□□□□ -1.14
COL15A1P39059 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.96□□□□□ -1.14
COL15A1P39059 LYPLA1P1-201ENST00000434514 622 ntBASIC7.96□□□□□ -1.14
COL15A1P39059 RN7SL193P-201ENST00000491708 276 ntBASIC7.96□□□□□ -1.14
COL15A1P39059 AC091965.3-201ENST00000506236 208 ntBASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms