Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.7□□□□□ -1.34
CHRNA3P32297 AC011500.1-201ENST00000601963 469 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 AL139041.1-201ENST00000605480 610 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.7□□□□□ -1.34
CHRNA3P32297 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.7□□□□□ -1.34
CHRNA3P32297 AC089999.3-201ENST00000622440 577 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.7□□□□□ -1.34
CHRNA3P32297 AC022726.2-201ENST00000634673 547 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.7□□□□□ -1.34
CHRNA3P32297 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.7□□□□□ -1.34
CHRNA3P32297 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CHRNA3P32297 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA3P32297 CUBNP3-201ENST00000457461 1784 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA3P32297 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.69□□□□□ -1.34
CHRNA3P32297 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA3P32297 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
CHRNA3P32297 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA3P32297 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
CHRNA3P32297 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA3P32297 RNA5SP478-201ENST00000364657 115 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 RNU6-673P-201ENST00000365084 104 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA3P32297 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 GPN3P1-201ENST00000423883 535 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA3P32297 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.69□□□□□ -1.34
CHRNA3P32297 LINC00328-2P-201ENST00000436585 219 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA3P32297 CCNJP1-201ENST00000450600 1149 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.69□□□□□ -1.34
CHRNA3P32297 AC022206.1-201ENST00000495947 347 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CHRNA3P32297 SUMO2P19-201ENST00000518920 295 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.69□□□□□ -1.34
CHRNA3P32297 AP003033.2-201ENST00000528901 805 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.69□□□□□ -1.34
CHRNA3P32297 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.69□□□□□ -1.34
CHRNA3P32297 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA3P32297 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.69□□□□□ -1.34
CHRNA3P32297 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.69□□□□□ -1.34
CHRNA3P32297 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.69□□□□□ -1.34
CHRNA3P32297 AC012368.3-201ENST00000604190 219 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 AC009779.8-202ENST00000607990 932 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.69□□□□□ -1.34
CHRNA3P32297 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA3P32297 MIR6780B-201ENST00000610307 79 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.69□□□□□ -1.34
CHRNA3P32297 AC073488.9-201ENST00000631601 754 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 MAPK10-287ENST00000641217 3037 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA3P32297 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA3P32297 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA3P32297 SNX18P3-202ENST00000565670 1750 ntBASIC6.69□□□□□ -1.34
CHRNA3P32297 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA3P32297 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.69□□□□□ -1.34
CHRNA3P32297 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA3P32297 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA3P32297 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA3P32297 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA3P32297 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHRNA3P32297 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
CHRNA3P32297 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.68□□□□□ -1.34
CHRNA3P32297 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.68□□□□□ -1.34
CHRNA3P32297 AC078880.4-201ENST00000617627 1749 ntBASIC6.68□□□□□ -1.34
CHRNA3P32297 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CHRNA3P32297 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHRNA3P32297 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHRNA3P32297 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHRNA3P32297 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CHRNA3P32297 RN7SKP250-201ENST00000363924 321 ntBASIC6.68□□□□□ -1.34
CHRNA3P32297 RNU1-59P-201ENST00000364829 162 ntBASIC6.68□□□□□ -1.34
CHRNA3P32297 MRPS6P2-201ENST00000381143 370 ntBASIC6.68□□□□□ -1.34
CHRNA3P32297 AC099535.1-201ENST00000408928 371 ntBASIC6.68□□□□□ -1.34
CHRNA3P32297 MRPS21P5-201ENST00000417885 231 ntBASIC6.68□□□□□ -1.34
CHRNA3P32297 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.68□□□□□ -1.34
CHRNA3P32297 AL139184.1-202ENST00000422303 222 ntBASIC6.68□□□□□ -1.34
CHRNA3P32297 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.68□□□□□ -1.34
CHRNA3P32297 SUMO2P8-201ENST00000434672 286 ntBASIC6.68□□□□□ -1.34
CHRNA3P32297 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.68□□□□□ -1.34
CHRNA3P32297 AC079922.1-201ENST00000443291 359 ntBASIC6.68□□□□□ -1.34
CHRNA3P32297 RN7SL221P-201ENST00000466190 281 ntBASIC6.68□□□□□ -1.34
CHRNA3P32297 RPL5P14-201ENST00000494197 878 ntBASIC6.68□□□□□ -1.34
CHRNA3P32297 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.68□□□□□ -1.34
CHRNA3P32297 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.68□□□□□ -1.34
CHRNA3P32297 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.68□□□□□ -1.34
CHRNA3P32297 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHRNA3P32297 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.68□□□□□ -1.34
CHRNA3P32297 TDGP1-201ENST00000543961 1229 ntBASIC6.68□□□□□ -1.34
CHRNA3P32297 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.68□□□□□ -1.34
CHRNA3P32297 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms