Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.8□□□□□ -1.48
SHC1P29353 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.8□□□□□ -1.48
SHC1P29353 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SHC1P29353 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.8□□□□□ -1.48
SHC1P29353 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
SHC1P29353 AL353743.3-201ENST00000442109 1468 ntBASIC5.8□□□□□ -1.48
SHC1P29353 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHC1P29353 AL050335.1-201ENST00000396909 869 ntBASIC5.8□□□□□ -1.48
SHC1P29353 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.8□□□□□ -1.48
SHC1P29353 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 GPN3P1-201ENST00000423883 535 ntBASIC5.8□□□□□ -1.48
SHC1P29353 GTF3AP6-201ENST00000432585 986 ntBASIC5.8□□□□□ -1.48
SHC1P29353 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 RPL29P23-201ENST00000486188 442 ntBASIC5.8□□□□□ -1.48
SHC1P29353 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.8□□□□□ -1.48
SHC1P29353 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.8□□□□□ -1.48
SHC1P29353 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
SHC1P29353 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 RNA5SP418-201ENST00000515951 117 ntBASIC5.8□□□□□ -1.48
SHC1P29353 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.8□□□□□ -1.48
SHC1P29353 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.8□□□□□ -1.48
SHC1P29353 AP003080.1-202ENST00000526526 915 ntBASIC5.8□□□□□ -1.48
SHC1P29353 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.8□□□□□ -1.48
SHC1P29353 AC135983.3-201ENST00000528049 1226 ntBASIC5.8□□□□□ -1.48
SHC1P29353 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SHC1P29353 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SHC1P29353 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.8□□□□□ -1.48
SHC1P29353 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 TPRX1P1-201ENST00000557620 319 ntBASIC5.8□□□□□ -1.48
SHC1P29353 AC138207.8-204ENST00000579588 527 ntBASIC5.8□□□□□ -1.48
SHC1P29353 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.8□□□□□ -1.48
SHC1P29353 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.8□□□□□ -1.48
SHC1P29353 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.8□□□□□ -1.48
SHC1P29353 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.8□□□□□ -1.48
SHC1P29353 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SHC1P29353 AC079753.1-201ENST00000623243 3868 ntBASIC5.8□□□□□ -1.48
SHC1P29353 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.8□□□□□ -1.48
SHC1P29353 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SHC1P29353 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.8□□□□□ -1.48
SHC1P29353 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.8□□□□□ -1.48
SHC1P29353 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.8□□□□□ -1.48
SHC1P29353 AC074141.1-201ENST00000588129 2995 ntBASIC5.79□□□□□ -1.48
SHC1P29353 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.79□□□□□ -1.48
SHC1P29353 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.79□□□□□ -1.48
SHC1P29353 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.79□□□□□ -1.48
SHC1P29353 MAPK10-287ENST00000641217 3037 ntBASIC5.79□□□□□ -1.48
SHC1P29353 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.79□□□□□ -1.48
SHC1P29353 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 AC110373.1-201ENST00000505994 3505 ntBASIC5.79□□□□□ -1.48
SHC1P29353 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 AC009831.5-201ENST00000624000 3189 ntBASIC5.79□□□□□ -1.48
SHC1P29353 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.79□□□□□ -1.48
SHC1P29353 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.79□□□□□ -1.48
SHC1P29353 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 AC002127.1-201ENST00000421305 225 ntBASIC5.79□□□□□ -1.48
SHC1P29353 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.79□□□□□ -1.48
SHC1P29353 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.79□□□□□ -1.48
SHC1P29353 AC013403.1-201ENST00000436954 263 ntBASIC5.79□□□□□ -1.48
SHC1P29353 AL451063.1-201ENST00000450164 1133 ntBASIC5.79□□□□□ -1.48
SHC1P29353 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.79□□□□□ -1.48
SHC1P29353 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.79□□□□□ -1.48
SHC1P29353 GM2AP2-201ENST00000491764 562 ntBASIC5.79□□□□□ -1.48
SHC1P29353 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.79□□□□□ -1.48
SHC1P29353 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.79□□□□□ -1.48
SHC1P29353 IGHV1-14-201ENST00000523391 241 ntBASIC5.79□□□□□ -1.48
SHC1P29353 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.79□□□□□ -1.48
SHC1P29353 AC124891.1-201ENST00000536322 519 ntBASIC5.79□□□□□ -1.48
SHC1P29353 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.79□□□□□ -1.48
SHC1P29353 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.79□□□□□ -1.48
SHC1P29353 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.79□□□□□ -1.48
SHC1P29353 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.79□□□□□ -1.48
SHC1P29353 WBP1LP11-201ENST00000586141 328 ntBASIC5.79□□□□□ -1.48
SHC1P29353 AC021422.1-201ENST00000621212 473 ntBASIC5.79□□□□□ -1.48
SHC1P29353 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.79□□□□□ -1.48
SHC1P29353 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.79□□□□□ -1.48
SHC1P29353 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 AC011369.2-201ENST00000624423 1567 ntBASIC5.79□□□□□ -1.48
SHC1P29353 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHC1P29353 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SHC1P29353 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHC1P29353 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.78□□□□□ -1.48
SHC1P29353 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHC1P29353 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHC1P29353 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms