Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MORF4-201ENST00000447135 971 ntBASIC5.99□□□□□ -1.45
COL5A1P20908 AL139156.3-201ENST00000454802 394 ntBASIC5.99□□□□□ -1.45
COL5A1P20908 RPL32P9-201ENST00000487963 407 ntBASIC5.99□□□□□ -1.45
COL5A1P20908 NPM1P27-201ENST00000502784 830 ntBASIC5.99□□□□□ -1.45
COL5A1P20908 AC092593.2-201ENST00000513866 913 ntBASIC5.99□□□□□ -1.45
COL5A1P20908 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.99□□□□□ -1.45
COL5A1P20908 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.99□□□□□ -1.45
COL5A1P20908 AC135626.1-201ENST00000556983 435 ntBASIC5.99□□□□□ -1.45
COL5A1P20908 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.99□□□□□ -1.45
COL5A1P20908 SNORD95-201ENST00000579879 68 ntBASIC5.99□□□□□ -1.45
COL5A1P20908 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL5A1P20908 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL5A1P20908 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
COL5A1P20908 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.99□□□□□ -1.45
COL5A1P20908 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL5A1P20908 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.99□□□□□ -1.45
COL5A1P20908 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL5A1P20908 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COL5A1P20908 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.99□□□□□ -1.45
COL5A1P20908 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC5.99□□□□□ -1.45
COL5A1P20908 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.99□□□□□ -1.45
COL5A1P20908 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL5A1P20908 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.99□□□□□ -1.45
COL5A1P20908 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL5A1P20908 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL5A1P20908 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.99□□□□□ -1.45
COL5A1P20908 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL5A1P20908 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.99□□□□□ -1.45
COL5A1P20908 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.99□□□□□ -1.45
COL5A1P20908 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.99□□□□□ -1.45
COL5A1P20908 PTMAP6-201ENST00000439110 327 ntBASIC5.99□□□□□ -1.45
COL5A1P20908 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.99□□□□□ -1.45
COL5A1P20908 RPSAP37-201ENST00000470913 821 ntBASIC5.99□□□□□ -1.45
COL5A1P20908 AC093270.2-201ENST00000486157 792 ntBASIC5.99□□□□□ -1.45
COL5A1P20908 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.99□□□□□ -1.45
COL5A1P20908 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.99□□□□□ -1.45
COL5A1P20908 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL5A1P20908 AC079600.1-201ENST00000550326 297 ntBASIC5.99□□□□□ -1.45
COL5A1P20908 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL5A1P20908 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.99□□□□□ -1.45
COL5A1P20908 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.99□□□□□ -1.45
COL5A1P20908 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.99□□□□□ -1.45
COL5A1P20908 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.99□□□□□ -1.45
COL5A1P20908 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.99□□□□□ -1.45
COL5A1P20908 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.99□□□□□ -1.45
COL5A1P20908 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.99□□□□□ -1.45
COL5A1P20908 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COL5A1P20908 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL5A1P20908 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC5.99□□□□□ -1.45
COL5A1P20908 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COL5A1P20908 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL5A1P20908 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL5A1P20908 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL5A1P20908 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL5A1P20908 CDY5P-201ENST00000411487 1580 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 CDY9P-201ENST00000451397 1580 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL5A1P20908 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL5A1P20908 AC110716.2-201ENST00000563865 3945 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL5A1P20908 AC073429.2-201ENST00000569694 1444 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL5A1P20908 AL391262.1-201ENST00000556558 1992 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 SNORA74A-201ENST00000364089 198 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 AL354890.1-201ENST00000413730 346 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 RPL35AP31-201ENST00000418340 337 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 AC064862.4-201ENST00000442180 334 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 GAPDHP23-201ENST00000444823 993 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
COL5A1P20908 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.98□□□□□ -1.45
COL5A1P20908 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.98□□□□□ -1.45
COL5A1P20908 Y_RNA.710-201ENST00000516975 110 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 TMEM97P2-201ENST00000517841 403 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 RPA2P3-201ENST00000533268 770 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 AL121579.2-201ENST00000555466 590 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.98□□□□□ -1.45
COL5A1P20908 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.98□□□□□ -1.45
COL5A1P20908 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.98□□□□□ -1.45
COL5A1P20908 MIR3189-201ENST00000578735 73 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 AP005119.1-201ENST00000580956 292 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.98□□□□□ -1.45
COL5A1P20908 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.98□□□□□ -1.45
COL5A1P20908 MIR6748-201ENST00000610433 71 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.98□□□□□ -1.45
COL5A1P20908 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.98□□□□□ -1.45
COL5A1P20908 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.98□□□□□ -1.45
COL5A1P20908 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL5A1P20908 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL5A1P20908 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
COL5A1P20908 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL5A1P20908 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.98□□□□□ -1.45
COL5A1P20908 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC5.98□□□□□ -1.45
COL5A1P20908 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
COL5A1P20908 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC5.98□□□□□ -1.45
COL5A1P20908 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
COL5A1P20908 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL5A1P20908 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
COL5A1P20908 MFSD8-218ENST00000641186 4448 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
COL5A1P20908 AC106872.5-201ENST00000508856 1416 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms