Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL035461.2-201ENST00000619201 524 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.92□□□□□ -1.3
COL6A2P12110 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.92□□□□□ -1.3
COL6A2P12110 AC129502.1-201ENST00000623261 1654 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL6A2P12110 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.92□□□□□ -1.3
COL6A2P12110 AC062029.1-202ENST00000606164 3651 ntBASIC6.92□□□□□ -1.3
COL6A2P12110 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL6A2P12110 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
COL6A2P12110 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL6A2P12110 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
COL6A2P12110 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.91□□□□□ -1.3
COL6A2P12110 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 AL359715.3-201ENST00000569267 2123 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 AL157831.2-201ENST00000564681 3095 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
COL6A2P12110 ZNF402P-201ENST00000404435 3100 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.91□□□□□ -1.3
COL6A2P12110 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
COL6A2P12110 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 AL359263.1-201ENST00000441188 2796 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 SNORA51.7-201ENST00000384171 134 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 MIR128-2-201ENST00000384893 84 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 RNU6-316P-201ENST00000391027 107 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 LRRC37BP1-201ENST00000398851 714 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 SNORA79B-201ENST00000410557 148 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 RPSAP60-201ENST00000415403 880 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 AL713922.1-201ENST00000416477 747 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.91□□□□□ -1.3
COL6A2P12110 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.91□□□□□ -1.3
COL6A2P12110 KRR1P1-201ENST00000419430 803 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.91□□□□□ -1.3
COL6A2P12110 LSM3P3-201ENST00000436601 306 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 CR769776.1-201ENST00000441254 787 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 OR10R1P-201ENST00000441524 1141 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 KATNBL1P3-201ENST00000443475 909 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 RAB28P3-201ENST00000448325 597 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 AC112492.1-201ENST00000449607 712 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 VN1R40P-201ENST00000455196 941 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.91□□□□□ -1.3
COL6A2P12110 RPL34P34-201ENST00000465389 354 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 TAAR3P-201ENST00000466706 1078 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 RPL23AP8-201ENST00000479812 475 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 TAAR3P-202ENST00000481759 1025 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.91□□□□□ -1.3
COL6A2P12110 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC011352.2-201ENST00000514574 1016 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 AC117383.2-201ENST00000514722 322 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 AC067904.2-201ENST00000517322 1283 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.91□□□□□ -1.3
COL6A2P12110 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.91□□□□□ -1.3
COL6A2P12110 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC007834.2-201ENST00000536310 343 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.91□□□□□ -1.3
COL6A2P12110 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 AC110760.3-201ENST00000598794 467 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.91□□□□□ -1.3
COL6A2P12110 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC073333.2-201ENST00000603589 769 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 AC099785.1-201ENST00000605697 437 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 AC091768.1-201ENST00000609258 930 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC011471.4-201ENST00000638271 216 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.91□□□□□ -1.3
COL6A2P12110 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC105114.1-201ENST00000624795 1862 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
COL6A2P12110 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.91□□□□□ -1.3
COL6A2P12110 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.91□□□□□ -1.3
COL6A2P12110 AC018717.1-201ENST00000457712 1505 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.91□□□□□ -1.3
COL6A2P12110 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL6A2P12110 AP004289.1-201ENST00000436307 2205 ntBASIC6.91□□□□□ -1.3
COL6A2P12110 UGT2B27P-201ENST00000505092 1620 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL6A2P12110 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.9□□□□□ -1.3
COL6A2P12110 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL6A2P12110 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL6A2P12110 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms