Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.33□□□□□ -1.4
PCNAP12004 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.33□□□□□ -1.4
PCNAP12004 PSMC1P6-201ENST00000477233 1319 ntBASIC6.33□□□□□ -1.4
PCNAP12004 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 AC022613.3-201ENST00000560740 1346 ntBASIC6.33□□□□□ -1.4
PCNAP12004 KYNUP2-201ENST00000582280 1329 ntBASIC6.33□□□□□ -1.4
PCNAP12004 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.33□□□□□ -1.4
PCNAP12004 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PCNAP12004 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.33□□□□□ -1.4
PCNAP12004 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCNAP12004 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCNAP12004 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
PCNAP12004 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCNAP12004 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 RN7SKP205-201ENST00000410999 307 ntBASIC6.33□□□□□ -1.4
PCNAP12004 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 AL929472.1-201ENST00000417484 429 ntBASIC6.33□□□□□ -1.4
PCNAP12004 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.33□□□□□ -1.4
PCNAP12004 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.33□□□□□ -1.4
PCNAP12004 AC017099.1-201ENST00000448261 1028 ntBASIC6.33□□□□□ -1.4
PCNAP12004 AC099340.1-201ENST00000475247 599 ntBASIC6.33□□□□□ -1.4
PCNAP12004 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
PCNAP12004 NPM1P27-201ENST00000502784 830 ntBASIC6.33□□□□□ -1.4
PCNAP12004 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.33□□□□□ -1.4
PCNAP12004 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC6.33□□□□□ -1.4
PCNAP12004 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.33□□□□□ -1.4
PCNAP12004 AC008429.2-201ENST00000523057 864 ntBASIC6.33□□□□□ -1.4
PCNAP12004 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.33□□□□□ -1.4
PCNAP12004 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.33□□□□□ -1.4
PCNAP12004 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 U1.41-201ENST00000617626 165 ntBASIC6.33□□□□□ -1.4
PCNAP12004 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.33□□□□□ -1.4
PCNAP12004 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 AP003400.6-201ENST00000624698 740 ntBASIC6.33□□□□□ -1.4
PCNAP12004 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.33□□□□□ -1.4
PCNAP12004 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 OR4G1P-202ENST00000641173 1788 ntBASIC6.33□□□□□ -1.4
PCNAP12004 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.33□□□□□ -1.4
PCNAP12004 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.33□□□□□ -1.4
PCNAP12004 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCNAP12004 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PCNAP12004 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.32□□□□□ -1.4
PCNAP12004 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCNAP12004 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCNAP12004 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCNAP12004 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCNAP12004 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.32□□□□□ -1.4
PCNAP12004 AC005332.9-201ENST00000620266 2921 ntBASIC6.32□□□□□ -1.4
PCNAP12004 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCNAP12004 RNA5SP188-201ENST00000362916 129 ntBASIC6.32□□□□□ -1.4
PCNAP12004 RN7SKP257-201ENST00000364525 309 ntBASIC6.32□□□□□ -1.4
PCNAP12004 TRAV35-201ENST00000390462 330 ntBASIC6.32□□□□□ -1.4
PCNAP12004 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCNAP12004 PTPN2P1-201ENST00000423212 1072 ntBASIC6.32□□□□□ -1.4
PCNAP12004 GAPDHP33-201ENST00000443168 1013 ntBASIC6.32□□□□□ -1.4
PCNAP12004 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PCNAP12004 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCNAP12004 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.32□□□□□ -1.4
PCNAP12004 AL121578.2-201ENST00000448797 447 ntBASIC6.32□□□□□ -1.4
PCNAP12004 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.32□□□□□ -1.4
PCNAP12004 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCNAP12004 AC022080.2-201ENST00000452932 533 ntBASIC6.32□□□□□ -1.4
PCNAP12004 RN7SL372P-201ENST00000461982 298 ntBASIC6.32□□□□□ -1.4
PCNAP12004 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.32□□□□□ -1.4
PCNAP12004 RPL17P2-201ENST00000491913 451 ntBASIC6.32□□□□□ -1.4
PCNAP12004 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.32□□□□□ -1.4
PCNAP12004 GOLGA5P1-201ENST00000507317 980 ntBASIC6.32□□□□□ -1.4
PCNAP12004 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.32□□□□□ -1.4
PCNAP12004 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.32□□□□□ -1.4
PCNAP12004 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.32□□□□□ -1.4
PCNAP12004 KCTD9P4-201ENST00000526766 1166 ntBASIC6.32□□□□□ -1.4
PCNAP12004 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.32□□□□□ -1.4
PCNAP12004 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.32□□□□□ -1.4
PCNAP12004 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.32□□□□□ -1.4
PCNAP12004 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.32□□□□□ -1.4
PCNAP12004 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.32□□□□□ -1.4
PCNAP12004 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.32□□□□□ -1.4
PCNAP12004 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.32□□□□□ -1.4
PCNAP12004 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.32□□□□□ -1.4
PCNAP12004 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.32□□□□□ -1.4
PCNAP12004 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.32□□□□□ -1.4
PCNAP12004 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.32□□□□□ -1.4
PCNAP12004 AC009237.12-201ENST00000604755 742 ntBASIC6.32□□□□□ -1.4
PCNAP12004 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.32□□□□□ -1.4
PCNAP12004 SNORD96A-201ENST00000606577 79 ntBASIC6.32□□□□□ -1.4
PCNAP12004 AC093635.1-201ENST00000609028 555 ntBASIC6.32□□□□□ -1.4
PCNAP12004 AP001264.1-201ENST00000620602 703 ntBASIC6.32□□□□□ -1.4
PCNAP12004 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.32□□□□□ -1.4
PCNAP12004 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PCNAP12004 AC114546.4-201ENST00000624413 369 ntBASIC6.32□□□□□ -1.4
PCNAP12004 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.32□□□□□ -1.4
PCNAP12004 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms