Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC099654.3-201ENST00000447087 1546 ntBASIC6.02□□□□□ -1.45
CLPTM1O96005 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLPTM1O96005 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLPTM1O96005 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLPTM1O96005 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.02□□□□□ -1.45
CLPTM1O96005 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLPTM1O96005 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.01□□□□□ -1.45
CLPTM1O96005 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLPTM1O96005 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.01□□□□□ -1.45
CLPTM1O96005 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLPTM1O96005 AOX3P-204ENST00000491025 2107 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.01□□□□□ -1.45
CLPTM1O96005 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLPTM1O96005 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CLPTM1O96005 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CLPTM1O96005 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLPTM1O96005 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLPTM1O96005 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLPTM1O96005 AL096800.1-201ENST00000405326 893 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 MRPL32P1-201ENST00000406301 247 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 ZNF37CP-201ENST00000406795 241 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.01□□□□□ -1.45
CLPTM1O96005 OR52N3P-201ENST00000413417 934 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.01□□□□□ -1.45
CLPTM1O96005 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.01□□□□□ -1.45
CLPTM1O96005 CYCSP52-201ENST00000422857 310 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AL354766.1-201ENST00000423396 542 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AC018804.1-201ENST00000430381 618 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.01□□□□□ -1.45
CLPTM1O96005 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.01□□□□□ -1.45
CLPTM1O96005 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.01□□□□□ -1.45
CLPTM1O96005 MTND4LP12-201ENST00000448237 295 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.01□□□□□ -1.45
CLPTM1O96005 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.01□□□□□ -1.45
CLPTM1O96005 RPL7L1P3-201ENST00000455249 689 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AL133480.2-201ENST00000456723 487 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AC090602.1-201ENST00000469695 252 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AC093719.1-201ENST00000480427 441 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 MTCO1P55-201ENST00000489829 745 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AC018639.1-201ENST00000492994 442 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AC008868.1-201ENST00000509786 737 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AC114940.1-201ENST00000512162 1265 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.01□□□□□ -1.45
CLPTM1O96005 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.01□□□□□ -1.45
CLPTM1O96005 AC022784.5-201ENST00000522241 437 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 IGLVV-66-201ENST00000523818 341 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.01□□□□□ -1.45
CLPTM1O96005 TRAV11-201ENST00000539512 339 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.01□□□□□ -1.45
CLPTM1O96005 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.01□□□□□ -1.45
CLPTM1O96005 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.01□□□□□ -1.45
CLPTM1O96005 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.01□□□□□ -1.45
CLPTM1O96005 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.01□□□□□ -1.45
CLPTM1O96005 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLPTM1O96005 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.01□□□□□ -1.45
CLPTM1O96005 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 AC116165.3-201ENST00000614524 400 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLPTM1O96005 AL132640.3-201ENST00000630473 177 ntBASIC6.01□□□□□ -1.45
CLPTM1O96005 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLPTM1O96005 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLPTM1O96005 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLPTM1O96005 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.01□□□□□ -1.45
CLPTM1O96005 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CLPTM1O96005 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6□□□□□ -1.45
CLPTM1O96005 AL121768.1-201ENST00000613917 2544 ntBASIC6□□□□□ -1.45
CLPTM1O96005 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLPTM1O96005 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLPTM1O96005 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6□□□□□ -1.45
CLPTM1O96005 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLPTM1O96005 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLPTM1O96005 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CLPTM1O96005 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CLPTM1O96005 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CLPTM1O96005 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6□□□□□ -1.45
CLPTM1O96005 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CLPTM1O96005 MIR187-201ENST00000385062 109 ntBASIC6□□□□□ -1.45
CLPTM1O96005 RNU1-56P-201ENST00000391303 164 ntBASIC6□□□□□ -1.45
CLPTM1O96005 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CLPTM1O96005 EEF1GP6-201ENST00000402309 905 ntBASIC6□□□□□ -1.45
CLPTM1O96005 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6□□□□□ -1.45
CLPTM1O96005 SNRPEP5-201ENST00000425442 278 ntBASIC6□□□□□ -1.45
CLPTM1O96005 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLPTM1O96005 AC009518.3-201ENST00000438972 253 ntBASIC6□□□□□ -1.45
CLPTM1O96005 AL356133.1-201ENST00000444762 372 ntBASIC6□□□□□ -1.45
CLPTM1O96005 EIF3LP2-201ENST00000457262 807 ntBASIC6□□□□□ -1.45
CLPTM1O96005 BX323845.2-201ENST00000458382 234 ntBASIC6□□□□□ -1.45
CLPTM1O96005 RN7SL221P-201ENST00000466190 281 ntBASIC6□□□□□ -1.45
CLPTM1O96005 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6□□□□□ -1.45
CLPTM1O96005 AC008429.4-201ENST00000521201 182 ntBASIC6□□□□□ -1.45
CLPTM1O96005 RBMS2P1-201ENST00000525031 1226 ntBASIC6□□□□□ -1.45
CLPTM1O96005 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6□□□□□ -1.45
CLPTM1O96005 AC069240.2-201ENST00000550242 609 ntBASIC6□□□□□ -1.45
CLPTM1O96005 NPM1P42-201ENST00000560329 862 ntBASIC6□□□□□ -1.45
CLPTM1O96005 MTATP6P25-201ENST00000574491 261 ntBASIC6□□□□□ -1.45
CLPTM1O96005 AC011921.2-201ENST00000589465 152 ntBASIC6□□□□□ -1.45
CLPTM1O96005 OR7E19P-202ENST00000589942 844 ntBASIC6□□□□□ -1.45
CLPTM1O96005 AC011447.2-201ENST00000592921 283 ntBASIC6□□□□□ -1.45
CLPTM1O96005 AC020914.7-201ENST00000594477 545 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms