Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.08□□□□□ -1.44
CLDN9O95484 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.08□□□□□ -1.44
CLDN9O95484 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.08□□□□□ -1.44
CLDN9O95484 MORF4-201ENST00000447135 971 ntBASIC6.08□□□□□ -1.44
CLDN9O95484 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.08□□□□□ -1.44
CLDN9O95484 RPL7L1P3-201ENST00000455249 689 ntBASIC6.08□□□□□ -1.44
CLDN9O95484 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.08□□□□□ -1.44
CLDN9O95484 RANP2-201ENST00000456833 229 ntBASIC6.08□□□□□ -1.44
CLDN9O95484 RN7SL502P-201ENST00000481857 290 ntBASIC6.08□□□□□ -1.44
CLDN9O95484 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.08□□□□□ -1.44
CLDN9O95484 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.08□□□□□ -1.44
CLDN9O95484 AC139713.1-202ENST00000512366 460 ntBASIC6.08□□□□□ -1.44
CLDN9O95484 RNA5SP116-201ENST00000516132 98 ntBASIC6.08□□□□□ -1.44
CLDN9O95484 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.08□□□□□ -1.44
CLDN9O95484 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.08□□□□□ -1.44
CLDN9O95484 RPL41P2-201ENST00000544920 409 ntBASIC6.08□□□□□ -1.44
CLDN9O95484 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.08□□□□□ -1.44
CLDN9O95484 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.08□□□□□ -1.44
CLDN9O95484 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.08□□□□□ -1.44
CLDN9O95484 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.08□□□□□ -1.44
CLDN9O95484 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.08□□□□□ -1.44
CLDN9O95484 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.08□□□□□ -1.44
CLDN9O95484 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.08□□□□□ -1.44
CLDN9O95484 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN9O95484 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN9O95484 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.08□□□□□ -1.44
CLDN9O95484 AC068769.1-201ENST00000474767 2426 ntBASIC6.08□□□□□ -1.44
CLDN9O95484 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN9O95484 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
CLDN9O95484 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN9O95484 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.08□□□□□ -1.44
CLDN9O95484 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLDN9O95484 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN9O95484 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN9O95484 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLDN9O95484 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN9O95484 AP001541.1-201ENST00000623322 1904 ntBASIC6.07□□□□□ -1.44
CLDN9O95484 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.07□□□□□ -1.44
CLDN9O95484 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN9O95484 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN9O95484 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.07□□□□□ -1.44
CLDN9O95484 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLDN9O95484 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CLDN9O95484 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.07□□□□□ -1.44
CLDN9O95484 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN9O95484 AL451046.1-201ENST00000406097 534 ntBASIC6.07□□□□□ -1.44
CLDN9O95484 RN7SKP129-201ENST00000410288 299 ntBASIC6.07□□□□□ -1.44
CLDN9O95484 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.07□□□□□ -1.44
CLDN9O95484 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.07□□□□□ -1.44
CLDN9O95484 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.07□□□□□ -1.44
CLDN9O95484 GTF2IP14-201ENST00000441415 586 ntBASIC6.07□□□□□ -1.44
CLDN9O95484 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.07□□□□□ -1.44
CLDN9O95484 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.07□□□□□ -1.44
CLDN9O95484 AL445991.1-201ENST00000450381 475 ntBASIC6.07□□□□□ -1.44
CLDN9O95484 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.07□□□□□ -1.44
CLDN9O95484 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.07□□□□□ -1.44
CLDN9O95484 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLDN9O95484 AC093816.1-201ENST00000515076 913 ntBASIC6.07□□□□□ -1.44
CLDN9O95484 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.07□□□□□ -1.44
CLDN9O95484 RPA2P3-201ENST00000533268 770 ntBASIC6.07□□□□□ -1.44
CLDN9O95484 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.07□□□□□ -1.44
CLDN9O95484 AC008055.1-201ENST00000547032 609 ntBASIC6.07□□□□□ -1.44
CLDN9O95484 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.07□□□□□ -1.44
CLDN9O95484 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.07□□□□□ -1.44
CLDN9O95484 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.07□□□□□ -1.44
CLDN9O95484 AC037479.1-201ENST00000558361 625 ntBASIC6.07□□□□□ -1.44
CLDN9O95484 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.07□□□□□ -1.44
CLDN9O95484 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.07□□□□□ -1.44
CLDN9O95484 AC024267.2-201ENST00000582737 417 ntBASIC6.07□□□□□ -1.44
CLDN9O95484 NPIPB1P-202ENST00000588786 828 ntBASIC6.07□□□□□ -1.44
CLDN9O95484 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
CLDN9O95484 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.07□□□□□ -1.44
CLDN9O95484 AC003992.1-201ENST00000635364 557 ntBASIC6.07□□□□□ -1.44
CLDN9O95484 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN9O95484 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN9O95484 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN9O95484 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CLDN9O95484 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN9O95484 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
CLDN9O95484 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN9O95484 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CLDN9O95484 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN9O95484 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLDN9O95484 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLDN9O95484 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.06□□□□□ -1.44
CLDN9O95484 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
CLDN9O95484 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CLDN9O95484 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.06□□□□□ -1.44
CLDN9O95484 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.06□□□□□ -1.44
CLDN9O95484 RPL21P50-201ENST00000417698 477 ntBASIC6.06□□□□□ -1.44
CLDN9O95484 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.06□□□□□ -1.44
CLDN9O95484 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.06□□□□□ -1.44
CLDN9O95484 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CLDN9O95484 OR6R1P-201ENST00000431838 940 ntBASIC6.06□□□□□ -1.44
CLDN9O95484 PSMD8P1-201ENST00000436275 769 ntBASIC6.06□□□□□ -1.44
CLDN9O95484 EMC3-AS1-205ENST00000438698 534 ntBASIC6.06□□□□□ -1.44
CLDN9O95484 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.06□□□□□ -1.44
CLDN9O95484 RN7SL369P-201ENST00000477138 299 ntBASIC6.06□□□□□ -1.44
CLDN9O95484 AC015524.1-201ENST00000491585 472 ntBASIC6.06□□□□□ -1.44
CLDN9O95484 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms