Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 HMGN2P27-201ENST00000427352 270 ntBASIC6.26□□□□□ -1.41
SHOX2O60902 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.26□□□□□ -1.41
SHOX2O60902 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.26□□□□□ -1.41
SHOX2O60902 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.26□□□□□ -1.41
SHOX2O60902 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.26□□□□□ -1.41
SHOX2O60902 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.26□□□□□ -1.41
SHOX2O60902 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.26□□□□□ -1.41
SHOX2O60902 AL162739.1-201ENST00000450606 307 ntBASIC6.26□□□□□ -1.41
SHOX2O60902 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.26□□□□□ -1.41
SHOX2O60902 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.26□□□□□ -1.41
SHOX2O60902 AP004607.5-201ENST00000532034 217 ntBASIC6.26□□□□□ -1.41
SHOX2O60902 OR4A43P-201ENST00000532938 908 ntBASIC6.26□□□□□ -1.41
SHOX2O60902 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.26□□□□□ -1.41
SHOX2O60902 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.26□□□□□ -1.41
SHOX2O60902 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.26□□□□□ -1.41
SHOX2O60902 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.26□□□□□ -1.41
SHOX2O60902 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.26□□□□□ -1.41
SHOX2O60902 TXNP4-201ENST00000575018 310 ntBASIC6.26□□□□□ -1.41
SHOX2O60902 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.26□□□□□ -1.41
SHOX2O60902 AC020916.2-201ENST00000591242 360 ntBASIC6.26□□□□□ -1.41
SHOX2O60902 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SHOX2O60902 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.26□□□□□ -1.41
SHOX2O60902 PRR13P3-201ENST00000603578 376 ntBASIC6.26□□□□□ -1.41
SHOX2O60902 AC099777.1-201ENST00000603779 1070 ntBASIC6.26□□□□□ -1.41
SHOX2O60902 AC015712.7-201ENST00000615211 635 ntBASIC6.26□□□□□ -1.41
SHOX2O60902 BX005040.2-201ENST00000620504 370 ntBASIC6.26□□□□□ -1.41
SHOX2O60902 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.26□□□□□ -1.41
SHOX2O60902 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
SHOX2O60902 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SHOX2O60902 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.26□□□□□ -1.41
SHOX2O60902 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.26□□□□□ -1.41
SHOX2O60902 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
SHOX2O60902 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHOX2O60902 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
SHOX2O60902 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.25□□□□□ -1.41
SHOX2O60902 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SHOX2O60902 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.25□□□□□ -1.41
SHOX2O60902 AL136100.1-201ENST00000407696 330 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 SNORA77.2-201ENST00000408571 112 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 AC245096.1-201ENST00000413104 546 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 AC117434.1-201ENST00000419971 836 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 AL136231.1-201ENST00000429407 730 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 ATP5LP4-201ENST00000434169 307 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.25□□□□□ -1.41
SHOX2O60902 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.25□□□□□ -1.41
SHOX2O60902 MED28P7-201ENST00000456611 530 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 AL096803.1-201ENST00000456921 1021 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.25□□□□□ -1.41
SHOX2O60902 PDCL3P4-201ENST00000489621 720 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 RPSAP51-201ENST00000497462 645 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.25□□□□□ -1.41
SHOX2O60902 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.25□□□□□ -1.41
SHOX2O60902 AC126615.2-201ENST00000553003 515 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.25□□□□□ -1.41
SHOX2O60902 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.25□□□□□ -1.41
SHOX2O60902 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.25□□□□□ -1.41
SHOX2O60902 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.25□□□□□ -1.41
SHOX2O60902 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.25□□□□□ -1.41
SHOX2O60902 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.25□□□□□ -1.41
SHOX2O60902 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.25□□□□□ -1.41
SHOX2O60902 FKBP1AP4-201ENST00000631775 336 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.25□□□□□ -1.41
SHOX2O60902 AC026108.1-201ENST00000635444 547 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHOX2O60902 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.25□□□□□ -1.41
SHOX2O60902 AC137056.2-201ENST00000624055 1958 ntBASIC6.25□□□□□ -1.41
SHOX2O60902 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHOX2O60902 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
SHOX2O60902 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.25□□□□□ -1.41
SHOX2O60902 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHOX2O60902 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
SHOX2O60902 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.25□□□□□ -1.41
SHOX2O60902 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHOX2O60902 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHOX2O60902 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.25□□□□□ -1.41
SHOX2O60902 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHOX2O60902 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.25□□□□□ -1.41
SHOX2O60902 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.24□□□□□ -1.41
SHOX2O60902 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHOX2O60902 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.24□□□□□ -1.41
SHOX2O60902 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHOX2O60902 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.24□□□□□ -1.41
SHOX2O60902 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHOX2O60902 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHOX2O60902 AP001029.2-203ENST00000589795 4910 ntBASIC6.24□□□□□ -1.41
SHOX2O60902 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHOX2O60902 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.24□□□□□ -1.41
SHOX2O60902 U3.14-201ENST00000365363 227 ntBASIC6.24□□□□□ -1.41
SHOX2O60902 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHOX2O60902 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHOX2O60902 RNA5SP53-201ENST00000391299 120 ntBASIC6.24□□□□□ -1.41
SHOX2O60902 AL445238.1-204ENST00000400311 463 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms