Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC188H7C350 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CCDC188H7C350 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
CCDC188H7C350 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CCDC188H7C350 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CCDC188H7C350 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC188H7C350 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC188H7C350 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC188H7C350 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC188H7C350 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC188H7C350 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC188H7C350 KYNUP3-201ENST00000574386 1341 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CCDC188H7C350 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC188H7C350 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC188H7C350 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC188H7C350 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC188H7C350 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC188H7C350 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC188H7C350 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC188H7C350 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC188H7C350 SNORD35A-201ENST00000363389 86 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC188H7C350 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC188H7C350 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC188H7C350 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC188H7C350 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC188H7C350 AL020997.1-201ENST00000446554 349 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 MORF4-201ENST00000447135 971 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 AC068491.1-201ENST00000449539 1241 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC188H7C350 AC115223.1-201ENST00000466377 870 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC188H7C350 AC093719.1-201ENST00000480427 441 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 AF305872.1-201ENST00000485217 471 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC188H7C350 RPL10P7-201ENST00000495649 625 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
CCDC188H7C350 RN7SKP242-201ENST00000515967 289 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC188H7C350 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CCDC188H7C350 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CCDC188H7C350 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC188H7C350 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC188H7C350 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC188H7C350 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC188H7C350 AC023968.1-201ENST00000560719 475 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC188H7C350 MIR4312-201ENST00000579909 76 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC188H7C350 AL137000.1-201ENST00000610528 1244 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 AC027559.1-201ENST00000636288 271 ntBASIC6.5□□□□□ -1.37
CCDC188H7C350 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC188H7C350 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC188H7C350 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC188H7C350 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CCDC188H7C350 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC188H7C350 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC188H7C350 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC188H7C350 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC188H7C350 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC188H7C350 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC188H7C350 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CCDC188H7C350 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC188H7C350 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC188H7C350 SMG1P5-202ENST00000529428 4219 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 SMG1P2-201ENST00000566127 4221 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC188H7C350 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC188H7C350 DNM1P47-203ENST00000571780 12667 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CCDC188H7C350 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC188H7C350 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC188H7C350 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CCDC188H7C350 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC188H7C350 AC010132.4-201ENST00000569883 1368 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 MIPEPP2-201ENST00000422560 1819 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC188H7C350 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CCDC188H7C350 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
CCDC188H7C350 RN7SKP191-201ENST00000364713 306 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC188H7C350 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CCDC188H7C350 FDPSP5-201ENST00000399474 1057 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 MICG-208ENST00000416822 132 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 YWHAZP5-201ENST00000419975 730 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC188H7C350 MTND1P10-201ENST00000426108 832 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC188H7C350 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC188H7C350 RPL3P11-201ENST00000434028 1146 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 KRT8P51-201ENST00000438938 274 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 PCMTD1P3-201ENST00000451824 472 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC188H7C350 RAB28P2-201ENST00000454299 641 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC188H7C350 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC188H7C350 RN7SL714P-201ENST00000487050 298 ntBASIC6.49□□□□□ -1.37
CCDC188H7C350 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC188H7C350 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms