Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 RNA5SP308-201ENST00000362532 115 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 U3.52-201ENST00000384034 216 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 SNORA7A-201ENST00000384765 139 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 MIR1266-201ENST00000408125 84 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 RNA5SP115-201ENST00000411160 107 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 TMA16P2-201ENST00000413187 601 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC006509.1-201ENST00000420788 634 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 RPL7AP14-201ENST00000424041 802 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC092106.2-201ENST00000436597 487 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AL390879.1-201ENST00000439143 386 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 NPM1P23-201ENST00000440193 849 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 HMGN1P32-201ENST00000441744 256 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 VN1R38P-201ENST00000450265 887 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC108751.3-201ENST00000461814 1020 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC063955.1-201ENST00000462872 685 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC022730.1-201ENST00000473114 568 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 SNRPCP3-201ENST00000474888 476 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 RPS7P11-201ENST00000484240 586 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 RPL5P14-201ENST00000494197 878 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC090058.1-201ENST00000498788 435 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC093870.1-201ENST00000506837 213 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 RN7SKP64-201ENST00000517206 328 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 IGHV1-14-201ENST00000523391 241 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 DCN-209ENST00000546745 1026 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC092718.4-201ENST00000566639 716 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC027796.1-201ENST00000575593 512 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 PPIAP14-201ENST00000577627 496 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 CCDC58P1-201ENST00000578567 430 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC114477.1-201ENST00000605097 605 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AL132640.3-201ENST00000630473 177 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 CLUHP10-201ENST00000631979 980 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AC011455.2-201ENST00000599320 3336 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 AL355488.2-201ENST00000609909 2850 ntBASIC4.83□□□□□ -1.64
HLA-DRB4X5D2U9 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 NEK2P2-201ENST00000438441 1338 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 SNORD94-201ENST00000386037 137 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 RNA5SP155-201ENST00000411154 129 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 MRPS21P2-201ENST00000424704 264 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 PSMD8P1-201ENST00000436275 769 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 COL11A2P1-205ENST00000441798 676 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 WDR82P2-201ENST00000444540 928 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 RN7SL83P-201ENST00000468131 297 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AP003385.3-201ENST00000472498 287 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 RPS4XP17-201ENST00000479057 754 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 RN7SL502P-201ENST00000481857 290 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC022415.1-202ENST00000486612 523 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC114324.2-202ENST00000503812 134 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AK6-204ENST00000512561 587 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms