Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 CLCA3P-203ENST00000490028 2781 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AL133243.4-201ENST00000623116 3109 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 AL137058.3-201ENST00000624531 3099 ntBASIC6.78□□□□□ -1.32
PCDHB1Q9Y5F3 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.77□□□□□ -1.32
PCDHB1Q9Y5F3 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
PCDHB1Q9Y5F3 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
PCDHB1Q9Y5F3 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
PCDHB1Q9Y5F3 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 DLEU2L-201ENST00000371086 3555 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 Z97989.1-201ENST00000531702 2421 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 RNU1-5P-201ENST00000362684 144 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 RN7SKP130-201ENST00000364924 301 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 MIR421-201ENST00000365696 85 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AL133260.1-201ENST00000405720 405 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 UBTFL2-201ENST00000411859 1191 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AC096537.2-201ENST00000413707 714 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 MARK2P12-201ENST00000420129 585 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AHCYP8-201ENST00000425108 209 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AC245291.3-201ENST00000443400 292 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AC006326.1-201ENST00000445465 787 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AP002345.1-201ENST00000456493 928 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 OR9N1P-202ENST00000494289 481 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AC021146.11-201ENST00000503319 491 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 GUSBP9-201ENST00000510138 584 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AC093878.1-201ENST00000515630 432 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 SNORA76.2-201ENST00000517095 137 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AC009712.1-201ENST00000564938 316 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AL158211.1-201ENST00000566763 763 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AP001496.3-201ENST00000580230 913 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 ZNF92P2-201ENST00000600543 1059 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AL035410.2-201ENST00000604963 864 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 CR589904.2-201ENST00000612533 440 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AC027559.1-201ENST00000636288 271 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AL445984.1-201ENST00000637834 659 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AC009501.3-201ENST00000605001 1352 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 MAPK10-344ENST00000641718 3746 ntBASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB1Q9Y5F3 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 AC022819.1-201ENST00000563495 3910 ntBASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB1Q9Y5F3 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms