Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 TOMM20P1-201ENST00000534518 427 ntBASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 MIR5095-201ENST00000578844 88 ntBASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.68□□□□□ -1.5
CLCF1Q9UBD9 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC010401.2-201ENST00000575137 4934 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 GCNT1P4-201ENST00000404096 329 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 FABP5P2-201ENST00000439042 408 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 HMGB1P7-201ENST00000450921 612 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC023818.1-201ENST00000498379 384 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC096754.1-201ENST00000508904 818 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 OR4D12P-201ENST00000509361 911 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC106800.3-201ENST00000511389 308 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 MAST4-IT1-201ENST00000514241 658 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC005363.1-201ENST00000530779 351 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC036111.2-201ENST00000533247 901 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC002310.3-201ENST00000569728 723 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC020765.1-201ENST00000604296 328 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC124916.2-201ENST00000604416 224 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 MIR6071-201ENST00000616741 78 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 AC073488.6-201ENST00000632293 754 ntBASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCF1Q9UBD9 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 RNA5SP115-201ENST00000411160 107 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AC002069.1-201ENST00000429649 1159 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 PSMD10P2-201ENST00000432890 672 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 RPL5P10-201ENST00000445207 894 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AC017007.3-201ENST00000479865 435 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AC092824.1-201ENST00000483524 576 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AP002453.1-201ENST00000492327 668 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AC084337.1-201ENST00000524809 686 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms