Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CNTN3Q9P232 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CNTN3Q9P232 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CNTN3Q9P232 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CNTN3Q9P232 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
CNTN3Q9P232 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.92□□□□□ -1.14
CNTN3Q9P232 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CNTN3Q9P232 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.92□□□□□ -1.14
CNTN3Q9P232 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC7.92□□□□□ -1.14
CNTN3Q9P232 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CNTN3Q9P232 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CNTN3Q9P232 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
CNTN3Q9P232 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CNTN3Q9P232 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CNTN3Q9P232 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CNTN3Q9P232 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CNTN3Q9P232 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CNTN3Q9P232 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CNTN3Q9P232 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 RPS3AP5-201ENST00000389400 821 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 RNU2-17P-201ENST00000410290 190 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 CDY17P-201ENST00000414121 1282 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CNTN3Q9P232 AL161742.1-201ENST00000418154 584 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 RPL23AP85-201ENST00000421838 433 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC019178.2-201ENST00000423595 505 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 CDY8P-201ENST00000428380 1279 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 ANXA2P2-201ENST00000435128 1020 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 ELOCP8-201ENST00000439309 332 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 ELOCP15-201ENST00000442090 332 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 CDY20P-201ENST00000447528 1279 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 PMS2P11-201ENST00000451831 574 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 CCNB1IP1P3-201ENST00000454702 829 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 BZW1P2-201ENST00000473537 826 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 SYPL1P1-201ENST00000473622 768 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 RPS27AP16-201ENST00000492222 470 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC021087.2-201ENST00000504656 1203 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC022296.2-201ENST00000512424 202 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC020937.1-201ENST00000519677 1013 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 PTK2-220ENST00000520151 573 ntTSL 4 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 PDCL2P2-201ENST00000533651 189 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 ULK4P2-202ENST00000564187 492 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC022662.1-201ENST00000580252 331 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 AL357078.3-201ENST00000607528 618 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 AL161931.1-201ENST00000612768 246 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC122133.1-201ENST00000613964 233 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC007347.2-201ENST00000623044 180 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 OR1S1-201ENST00000624470 978 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 OR8A1-204ENST00000642111 1145 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC027514.1-201ENST00000588561 1603 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 DDX43P1-201ENST00000510713 1763 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 AC126474.2-201ENST00000623268 1750 ntBASIC7.91□□□□□ -1.14
CNTN3Q9P232 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CNTN3Q9P232 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CNTN3Q9P232 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CNTN3Q9P232 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CNTN3Q9P232 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CNTN3Q9P232 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CNTN3Q9P232 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CNTN3Q9P232 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTN3Q9P232 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTN3Q9P232 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms