Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 RPS10P14-201ENST00000440748 502 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 COL11A2P1-205ENST00000441798 676 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 RANP2-201ENST00000456833 229 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 RN7SL655P-201ENST00000486087 298 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AL035690.1-201ENST00000490892 383 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 SUMO2P19-201ENST00000518920 295 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AC092865.1-201ENST00000544395 1023 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AC089984.3-201ENST00000552838 363 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 MIR132-201ENST00000591554 101 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AC005332.4-201ENST00000592752 579 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AC012175.1-201ENST00000603755 531 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 MIR6849-201ENST00000618543 69 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 AC119674.1-217ENST00000641942 1086 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 OR7E91P-202ENST00000642062 1198 ntBASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDHD3Q9BSH5 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AC092646.2-201ENST00000431242 2095 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 RNU1-5P-201ENST00000362684 144 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 MIR138-2-201ENST00000384916 84 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AL589794.1-201ENST00000424971 390 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AL354707.3-201ENST00000427308 331 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AC016908.1-201ENST00000442571 1219 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AC009244.1-201ENST00000450566 258 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 RPL7L1P3-201ENST00000455249 689 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AL133480.2-201ENST00000456723 487 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AC114728.1-201ENST00000488289 483 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 RPA2P3-201ENST00000533268 770 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 OR4C49P-201ENST00000563891 900 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 RNU4ATAC-201ENST00000580972 127 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AC020916.2-201ENST00000591242 360 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AL008582.1-201ENST00000609612 442 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AC069234.4-201ENST00000621276 412 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 OR7A1P-202ENST00000641542 1158 ntBASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDHD3Q9BSH5 AL136984.1-201ENST00000607611 1893 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms