Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 SHQ1P1-201ENST00000437111 1544 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
LITAFQ99732 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LITAFQ99732 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
LITAFQ99732 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 AC019077.1-201ENST00000356499 397 ntTSL 3 BASIC4.43□□□□□ -1.7
LITAFQ99732 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.43□□□□□ -1.7
LITAFQ99732 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.43□□□□□ -1.7
LITAFQ99732 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LITAFQ99732 AMELY-202ENST00000383036 621 ntTSL 5 BASIC4.43□□□□□ -1.7
LITAFQ99732 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 OR13D3P-201ENST00000412501 937 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AC017104.2-201ENST00000417000 321 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC092651.1-201ENST00000426110 312 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 AC239367.3-201ENST00000428996 814 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
LITAFQ99732 HBBP1-201ENST00000433329 439 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 HNRNPA1P18-201ENST00000433537 927 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 NQO1-204ENST00000439109 924 ntTSL 2 BASIC4.43□□□□□ -1.7
LITAFQ99732 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.43□□□□□ -1.7
LITAFQ99732 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC4.43□□□□□ -1.7
LITAFQ99732 RPL7P33-201ENST00000444159 742 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC4.43□□□□□ -1.7
LITAFQ99732 AL009048.1-201ENST00000450437 298 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AL603839.3-201ENST00000450713 605 ntTSL 3 BASIC4.43□□□□□ -1.7
LITAFQ99732 RPS18P13-201ENST00000461260 454 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC104629.2-201ENST00000468627 598 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 RN7SL621P-201ENST00000472565 299 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AL355032.1-201ENST00000472981 438 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 RN7SL549P-201ENST00000478997 282 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 RN7SL152P-201ENST00000484176 298 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 EIF4E2P2-201ENST00000492033 736 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
LITAFQ99732 HMGB1P3-201ENST00000502802 616 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC4.43□□□□□ -1.7
LITAFQ99732 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC4.43□□□□□ -1.7
LITAFQ99732 PRELID3BP5-201ENST00000508612 460 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.43□□□□□ -1.7
LITAFQ99732 RN7SKP253-201ENST00000516424 309 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC010376.1-201ENST00000522101 334 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 OR8G5-201ENST00000524943 1041 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AC118942.1-201ENST00000529674 1035 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 NPM1P35-201ENST00000533043 868 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
LITAFQ99732 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC007537.1-201ENST00000539347 327 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC084824.2-201ENST00000548906 345 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 LINC02327-206ENST00000551588 885 ntTSL 5 BASIC4.43□□□□□ -1.7
LITAFQ99732 AL157955.2-202ENST00000553921 467 ntTSL 3 BASIC4.43□□□□□ -1.7
LITAFQ99732 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC4.43□□□□□ -1.7
LITAFQ99732 AL121579.2-201ENST00000555466 590 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AGGF1P9-201ENST00000561884 913 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AC024270.2-201ENST00000568441 499 ntTSL 5 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC005758.1-201ENST00000586408 625 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 EIF1-207ENST00000591776 797 ntTSL 4 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC020914.7-201ENST00000594477 545 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AP001160.4-201ENST00000596971 382 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC025811.1-201ENST00000604312 472 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 QTRT1P1-201ENST00000604344 1078 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AC025171.4-201ENST00000607250 1047 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AC124016.2-201ENST00000610058 665 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AC027271.1-201ENST00000610270 610 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 AC009464.1-201ENST00000615731 469 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 C18orf12-201ENST00000623329 537 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AC211433.3-201ENST00000623770 375 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AC004777.1-201ENST00000624317 287 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 SMG7-216ENST00000638826 219 ntTSL 2 BASIC4.43□□□□□ -1.7
LITAFQ99732 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.43□□□□□ -1.7
LITAFQ99732 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.43□□□□□ -1.7
LITAFQ99732 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
LITAFQ99732 AC105235.1-201ENST00000623208 1816 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 EEF1A1P15-201ENST00000395772 1408 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 AC011455.2-201ENST00000599320 3336 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LITAFQ99732 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 AC140134.1-201ENST00000511830 3544 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms