Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX18Q96RF0 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.17□□□□□ -1.42
SNX18Q96RF0 AC026458.1-201ENST00000564330 438 ntBASIC6.17□□□□□ -1.42
SNX18Q96RF0 AC015911.5-201ENST00000587076 451 ntBASIC6.17□□□□□ -1.42
SNX18Q96RF0 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.17□□□□□ -1.42
SNX18Q96RF0 OR7E19P-202ENST00000589942 844 ntBASIC6.17□□□□□ -1.42
SNX18Q96RF0 AC092032.1-201ENST00000603090 165 ntBASIC6.17□□□□□ -1.42
SNX18Q96RF0 AL356608.1-201ENST00000610034 820 ntBASIC6.17□□□□□ -1.42
SNX18Q96RF0 AL445647.2-201ENST00000615170 130 ntBASIC6.17□□□□□ -1.42
SNX18Q96RF0 AP005212.3-201ENST00000619964 528 ntBASIC6.17□□□□□ -1.42
SNX18Q96RF0 AC097655.1-201ENST00000635075 318 ntBASIC6.17□□□□□ -1.42
SNX18Q96RF0 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX18Q96RF0 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX18Q96RF0 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX18Q96RF0 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX18Q96RF0 NEK2P4-201ENST00000425793 1329 ntBASIC6.17□□□□□ -1.42
SNX18Q96RF0 AL512310.3-201ENST00000547023 1335 ntBASIC6.17□□□□□ -1.42
SNX18Q96RF0 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX18Q96RF0 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SNX18Q96RF0 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SNX18Q96RF0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SNX18Q96RF0 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.17□□□□□ -1.42
SNX18Q96RF0 AC090774.4-201ENST00000578888 1372 ntBASIC6.17□□□□□ -1.42
SNX18Q96RF0 AC011455.2-201ENST00000599320 3336 ntBASIC6.17□□□□□ -1.42
SNX18Q96RF0 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX18Q96RF0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SNX18Q96RF0 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX18Q96RF0 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX18Q96RF0 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX18Q96RF0 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AL513548.1-201ENST00000562904 1724 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC006511.3-201ENST00000624929 1783 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 SNORA63.3-201ENST00000362682 132 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 RPL12P43-201ENST00000420608 499 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 RCC2P2-201ENST00000422174 918 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 GAPDHP69-201ENST00000425504 1008 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 OFD1P3Y-201ENST00000453312 783 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 RPS3AP53-201ENST00000454716 778 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 RBMY2EP-202ENST00000456360 940 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC010878.1-201ENST00000456500 1047 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 GAPDHP53-201ENST00000458397 924 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC068339.2-201ENST00000534395 618 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC007537.1-201ENST00000539347 327 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC090115.2-201ENST00000548060 883 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 AL121594.4-201ENST00000556211 1196 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 EIF4A3P1-201ENST00000578499 647 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 SIGLEC31P-201ENST00000594237 551 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 AL357094.1-201ENST00000603845 844 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 AF129408.1-201ENST00000608767 431 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 AL138955.1-201ENST00000622881 1040 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 AP003485.1-201ENST00000625093 753 ntBASIC6.16□□□□□ -1.42
SNX18Q96RF0 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX18Q96RF0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX18Q96RF0 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX18Q96RF0 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX18Q96RF0 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX18Q96RF0 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms