Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC010168.2-201ENST00000562691 5428 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 AC020658.2-201ENST00000559030 4020 ntBASIC6.6□□□□□ -1.35
HMGB4Q8WW32 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB4Q8WW32 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AC020978.6-201ENST00000571197 3177 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 RNU6-670P-201ENST00000364312 104 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 SNORA40.4-201ENST00000390971 128 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 RPL5P20-201ENST00000403848 896 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AL139039.2-201ENST00000407436 479 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 RN7SKP271-201ENST00000410528 320 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AL359092.1-201ENST00000417156 265 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 SETP10-201ENST00000424368 814 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 NAP1L4P2-201ENST00000425958 899 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AC073072.2-201ENST00000447425 348 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 SNX18P25-201ENST00000510539 758 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 RNU6-467P-201ENST00000517027 110 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AC023968.1-201ENST00000560719 475 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 VN1R81P-201ENST00000602085 372 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AC005972.3-201ENST00000606304 481 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AC091768.1-201ENST00000609258 930 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AL136097.3-201ENST00000611097 505 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AC010333.3-201ENST00000615100 402 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AC005277.2-201ENST00000617898 390 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AC008691.1-209ENST00000642094 814 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 AC093278.2-201ENST00000564956 2485 ntBASIC6.59□□□□□ -1.35
HMGB4Q8WW32 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HMGB4Q8WW32 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
HMGB4Q8WW32 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
HMGB4Q8WW32 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HMGB4Q8WW32 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HMGB4Q8WW32 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGB4Q8WW32 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGB4Q8WW32 AL359694.2-201ENST00000567753 1615 ntBASIC6.58□□□□□ -1.36
HMGB4Q8WW32 AP005139.1-201ENST00000580702 1647 ntBASIC6.58□□□□□ -1.36
HMGB4Q8WW32 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.58□□□□□ -1.36
HMGB4Q8WW32 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.58□□□□□ -1.36
HMGB4Q8WW32 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
HMGB4Q8WW32 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms