Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 MTND4P23-201ENST00000447723 1363 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 SNORD115-48-201ENST00000364764 76 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC234772.1-201ENST00000377927 937 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 RAP1BP1-201ENST00000412709 553 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 SETP15-201ENST00000412724 337 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AJ239321.1-201ENST00000424255 564 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC073900.1-201ENST00000429766 776 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC098826.1-201ENST00000433943 471 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC084290.1-201ENST00000434995 374 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AL136455.1-201ENST00000441083 1240 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 RHEBP1-201ENST00000448647 556 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 OR7E7P-201ENST00000455678 1012 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC034244.1-201ENST00000507687 207 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 SETP1-201ENST00000556014 845 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC040162.2-201ENST00000573092 157 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 RN7SL178P-201ENST00000582930 304 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AL590229.1-201ENST00000603497 542 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AL139286.2-201ENST00000606838 396 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AC099842.1-201ENST00000619919 596 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 METTL8-218ENST00000638989 876 ntTSL 5 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 METTL8-219ENST00000640734 726 ntTSL 2 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 MAPK10-365ENST00000641902 3825 ntBASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 AC011379.1-201ENST00000508713 3025 ntBASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 OR5H15-201ENST00000383696 930 ntBASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 RNU6-354P-201ENST00000383862 107 ntBASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 RNU6-610P-201ENST00000384264 107 ntBASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 RNU6-1215P-201ENST00000384441 102 ntBASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 RNU6-1242P-201ENST00000391052 103 ntBASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 RNU1-56P-201ENST00000391303 164 ntBASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 ZNF603P-201ENST00000405613 487 ntBASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.59□□□□□ -1.19
SHKBP1Q8TBC3 RAC1P4-201ENST00000419413 579 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms