Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 RPL12P16-201ENST00000431098 498 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AL356121.1-201ENST00000442911 156 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 RPL7AP71-201ENST00000451120 739 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 RPS27AP3-201ENST00000453803 454 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 RN7SL492P-201ENST00000460700 295 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 RN7SL390P-201ENST00000470634 284 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 SNRPCP3-201ENST00000474888 476 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 CR383656.1-201ENST00000484916 377 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AC131392.1-201ENST00000506490 633 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AC107952.1-201ENST00000524200 376 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 NPM1P5-201ENST00000557228 838 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AC009120.3-201ENST00000563335 499 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 RN7SL426P-201ENST00000579106 295 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 GLYATL1P2-202ENST00000588046 902 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AC069234.4-201ENST00000621276 412 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AC018628.1-201ENST00000624147 3819 ntBASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC112Q8NEF3 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 AL096800.1-201ENST00000405326 893 ntBASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 ST13P21-201ENST00000453250 1098 ntBASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 RPS16P9-201ENST00000477220 427 ntBASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 AC022206.1-201ENST00000495947 347 ntBASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 AC008868.1-201ENST00000509786 737 ntBASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 SCARNA5-201ENST00000516201 276 ntBASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 SCARNA11.1-201ENST00000516918 132 ntBASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 MIR3189-201ENST00000578735 73 ntBASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 AC093635.1-201ENST00000609028 555 ntBASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 AC005899.6-201ENST00000620729 297 ntBASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 CCNT2P1-201ENST00000423082 1315 ntBASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 KYNUP3-201ENST00000574386 1341 ntBASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC112Q8NEF3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.96□□□□□ -1.29
CCDC112Q8NEF3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CCDC112Q8NEF3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
CCDC112Q8NEF3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CCDC112Q8NEF3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 AC125238.2-201ENST00000430003 1440 ntBASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 RPL5P20-201ENST00000403848 896 ntBASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 AL136100.1-201ENST00000407696 330 ntBASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 AL354868.1-201ENST00000417077 482 ntBASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 OR5W1P-201ENST00000423705 938 ntBASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms