Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 AL162632.2-201ENST00000553933 399 ntBASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 AC005519.1-201ENST00000554490 601 ntBASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 AC093635.1-201ENST00000609028 555 ntBASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 RAB28P4-201ENST00000622233 665 ntBASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 AP005432.1-201ENST00000580891 3485 ntBASIC6.11□□□□□ -1.43
NUP54Q7Z3B4 MTND5P23-201ENST00000430812 1655 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AP002370.1-201ENST00000528055 1602 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC062029.1-202ENST00000606164 3651 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AL591848.4-201ENST00000567832 3472 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC009120.2-204ENST00000621548 2032 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 SAMMSON-210ENST00000641260 1308 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 RANP6-201ENST00000413691 644 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 CDY17P-201ENST00000414121 1282 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 CDY8P-201ENST00000428380 1279 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 UBE2V2P1-201ENST00000434717 398 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 NPM1P23-201ENST00000440193 849 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 GAPDHP33-201ENST00000443168 1013 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 CDY20P-201ENST00000447528 1279 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 SULT1D1P-201ENST00000458020 882 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC074386.1-206ENST00000487102 761 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC117500.1-201ENST00000497352 755 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 MTATP6P25-201ENST00000574491 261 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC024267.2-201ENST00000582737 417 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 RPL29P33-201ENST00000587474 316 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC245052.7-201ENST00000601161 359 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC114477.1-201ENST00000605097 605 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC079791.1-201ENST00000605356 973 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC005277.2-201ENST00000617898 390 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 MIR6503-201ENST00000622884 86 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC110597.1-201ENST00000562669 3176 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 SMG1P5-202ENST00000529428 4219 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 SMG1P2-201ENST00000566127 4221 ntBASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
NUP54Q7Z3B4 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 AL391261.1-201ENST00000555712 1479 ntBASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 PPIAP24-201ENST00000328558 471 ntBASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 RNA5SP350-201ENST00000363298 111 ntBASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 SNORA7A-201ENST00000384765 139 ntBASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 RPL7P58-201ENST00000402913 758 ntBASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 AC098592.2-201ENST00000413158 265 ntBASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.09□□□□□ -1.43
NUP54Q7Z3B4 AL359092.1-201ENST00000417156 265 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms