Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 BMS1P11-201ENST00000442351 885 ntBASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AL020997.1-201ENST00000446554 349 ntBASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 BMS1P9-201ENST00000457640 885 ntBASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC009567.2-201ENST00000502989 349 ntBASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC008676.3-201ENST00000521237 435 ntBASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC089984.3-201ENST00000552838 363 ntBASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AL121936.2-201ENST00000641935 662 ntBASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC004023.1-201ENST00000561473 1744 ntBASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NHLRC1Q6VVB1 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 DDX18P6-201ENST00000450119 1997 ntBASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 ARSFP1-201ENST00000398758 477 ntBASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 MRPS21P5-201ENST00000417885 231 ntBASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 MTCYBP14-201ENST00000457471 715 ntBASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 RPSAP24-201ENST00000461543 873 ntBASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 RPL5P12-201ENST00000477071 851 ntBASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 RPL5P33-201ENST00000487833 905 ntBASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 AC105420.1-201ENST00000504389 582 ntBASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 AC084851.2-201ENST00000530377 364 ntBASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 MIR6774-201ENST00000614651 70 ntBASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 AC021422.1-201ENST00000621212 473 ntBASIC5.81□□□□□ -1.48
NHLRC1Q6VVB1 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms